Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0570 ATGATGGATCCAAGCAACCTTTTGCCAGCTGATGGACTTGAAGAAGTCCACCAAAATGGTGTTCATGATGAACTGTCTATTTTTGGAAAGGATGGTATTGCTTCCAATGTAGACCCTGGTGTTACCAAAATTATAGAAACTGCAGCTACAAATGGAAATCTTGAAAATTTCATCCAGTATGATAGCACTGCAACTGATTATTCGTCCAAGGAAGAAATCAAGGAAGGATCAAACGATAATATATATATGAACAATGTCACCATTTCTAAGGAAGAGGAAGCAGAAATCATAGATCGGACAGAGCAATTAAAAGTAGGAAAAGGTCCTGCAAAGAATAAGAATGCAAAGCCACCAAGCCCCAGAGGCAGTCATGCAAGTTCAGTTAAAAAGAACAAAGATGGAAAAGATGAAGAGGTAGCATCTTCTGTTTCAAATGGTACTTTTGCTTCAGACTCTCACCCAAGACAGCCTATTAAAAACAGATCATTGAGTGACAAGCAGGCTCGATTGTCCAAGCACCCTGGAAAGTCTAACACAGCACATTCTGAAGAATCAATGGAGAAGACTAGACCACAATTATCGAAGAAAGATCCCCATGATAATCTTCAAGGAGAAGCAGAATCTTCTTCTCCTACTGCAGAAGATGCCAAACCTCGCAGGGTGGGGGCGCTCCCAAAATATGGATTCAGTTTCAAGTGTGATGAGCGAGCTGAGAGAAGAAAAGAGTTCTACACTAAGCTTGAGGAAAAGATTCACGCAAAGGAAGTGGAGGAGAGTAACTTGCAAGCAAAAACCAAGGAGAACCAAGAAGCCGAGATTAAGATGCTTAGAAAAAGTCTAGGATTTAAAGCAACTCCAATGCCAAGCTTCTACCAGGAGCCTCCTCCTCCTAGGGCGGAGTTAAGAAAGATGCCAACTACCAGAGCTAAATCTCCCAAGCTTGGTCGCAAGAAGAGTTCAACAAATTCAGAGCCAGAAGGAAACACTAGCAACAGTGCTCGACAAGGTCGTTTAAGTCTGGATGAGAAAATGTCTCAGACTAACCCCACTAATGGCATTAGTCCTGTTCATCCAAAGAAGCCACAACGAAAGTCTCTTCCTCCACGACTGGCTTCTGAAAAGATCAGTTCATCCAATTCAGCGTCTGTGAGAACCTCATCTAAGGCAGTGAATGGTGGCAAAACCTCCTTATCAAGTGTAACGGCTGAAGTTACCTTATCCAATGCAAGAGGGAAAGAGAAAGTTCAAATAGCTGCAGCAGCCACTGAAGAGAACAATGCCTTATTGAATGAGACAAGTAAAGTTCTTCCTGTGAATGGTGATTTAGTCGTTGAAGAGAAACCACAGCTCAACTTGGCACAAGAACCCATAGCAGCGGAGCACTAA 1386 0.4257 MMDPSNLLPADGLEEVHQNGVHDELSIFGKDGIASNVDPGVTKIIETAATNGNLENFIQYDSTATDYSSKEEIKEGSNDNIYMNNVTISKEEEAEIIDRTEQLKVGKGPAKNKNAKPPSPRGSHASSVKKNKDGKDEEVASSVSNGTFASDSHPRQPIKNRSLSDKQARLSKHPGKSNTAHSEESMEKTRPQLSKKDPHDNLQGEAESSSPTAEDAKPRRVGALPKYGFSFKCDERAERRKEFYTKLEEKIHAKEVEESNLQAKTKENQEAEIKMLRKSLGFKATPMPSFYQEPPPPRAELRKMPTTRAKSPKLGRKKSSTNSEPEGNTSNSARQGRLSLDEKMSQTNPTNGISPVHPKKPQRKSLPPRLASEKISSSNSASVRTSSKAVNGGKTSLSSVTAEVTLSNARGKEKVQIAAAATEENNALLNETSKVLPVNGDLVVEEKPQLNLAQEPIAAEH* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0570 461 MobiDBLite consensus disorder prediction 140 157 - -
Gso6g0570 461 Coils Coil 244 274 - -
Gso6g0570 461 PANTHER PROTEIN WVD2-LIKE 4 2 451 IPR044833 GO:0008017
Gso6g0570 461 MobiDBLite consensus disorder prediction 316 355 - -
Gso6g0570 461 MobiDBLite consensus disorder prediction 259 398 - -
Gso6g0570 461 Pfam Targeting protein for Xklp2 (TPX2) domain 229 303 IPR027329 -
Gso6g0570 461 PANTHER PROTEIN WVD2-LIKE 5-RELATED 2 451 - -
Gso6g0570 461 MobiDBLite consensus disorder prediction 100 226 - -
Gso6g0570 461 MobiDBLite consensus disorder prediction 259 277 - -
Gso6g0570 461 MobiDBLite consensus disorder prediction 371 398 - -
Gso6g0570 461 MobiDBLite consensus disorder prediction 158 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0570 Gso-Chr6 5286446 5293195 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0570 - - gmx:100793597 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0573 4 5550587 5556644 Gso6g0570 6 5286446 5293195 GST
Gso14g1006 14 14613663 14619707 Gso6g0570 6 5286446 5293195 PCT
Gso17g1792 17 35118337 35124386 Gso6g0570 6 5286446 5293195 PCT
Gso6g0570 6 5286446 5293195 Gso14g1006 14 14613663 14619707 PCT
Gso6g0570 6 5286446 5293195 Gso17g1792 17 35118337 35124386 PCT