Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0573 ATGATCTTGATGATGGATCCAAGCAACCTTTTGCCAGCTGATGGACTTGAAGAAGTCCACCAAAATGGTGTTCATGACGAACTGTCTAATTCTGGAAAGGATGATATTGCCTCCAATGTAGACCCTGGTGTTACCAAAATTATAGAAACTGCCGCTACAAATGGAAATTTTGAAAATTTCATCCAGTATGATAGCACTGCAACTGATTACTCGTCCAAGGAAGGATCAAACGATAACATAGATGTTAACAATGTCACCATTTCCAAGGAAGAGGAAGCAAAAATCATAGATCGGACAGGGCAATTAAAAGTAGGCAAAGGTCCTGCCAAGAATAAGAATGCAAAGCCACCAAGCCCCAGAGGCAGTCATGTAAGTTCAGTTAAAAAGAACAAAGATGGAAAAGATGAAGAGGTAGCATCTGCTGTTTCAAATGGTACTTTTGCTTTAGACTCTCACCCAAGACAGCCAATTAAAAACAGATCATTGAGTGACAAGCAGGCTCGATTGTCCAAGCACCCTGGAAAGTCTAATGCAGCAACTTCTGAAGAATCAATGGAGAAGTCTAGACCACGATTATTGAAGAAAGAGCCCCTTGATAATCTTCAAGGAGAAACAGAATCTTCTTCTCCTACCGCAGAAGATGCCAAACCTCGCAGGGTGGGAGCACTTCCAAAATATGGATTCAGTTTCAAGTGTGATGAGCGAGCTGAGAGAAGAAAAGAGTTCTACACTAAGCTTGAGGAAAAGATTCATGCTAAGGAAGTGGAGGAGAGTAACCTGCAAGCAAAAACCAAGGAGACCCAAGAAGCTGAGATTAAGATGCTTCGAAAAAGTCTAGGATTTAAAGCAACTCCAATGCCAAGCTTCTACCAGGAGCCTCCTCCTCCTAGGGTGGAGTTAAAAAAGATGCCAACTACAAGAGCTAAATCTCCCAAGCTTGGTCGCAAGAAGAGTTCAACGAATTCAGAGCCAGAAGGAAACCTTAGCAACAATGCTCGACAAGGTCGTTTAAGTCTGGATGAGAAAGTGTCTCAGACTAACCCCACTAAAGGAATTAGTCCTGTTCATCAAAAGAAGCCACAACGAAAGTCTCTTCCTCCGCAACTGACTTCTGAAAAGACCAGGTCATCCAATTCTGCGTCTGTGAGGACCTCATCTAAGGCAGTGAATGGTGGTAAAAACTCCTTATCAAGTGTAACAACTGAAGTTACCACCTTATCCAATCCAAGAGAGGAAGAGAAAGTTGAAATAGCTGCAGCCACTGAAGAGAACAATGTCTTATTGAATGAGACAAGTAAAGCTCTTCCTCTGAATATAGAGCCAGATGAAACAGAATCTCCTGTGAATGGTGATTTAGTCATTCAAGAGAAACCACAGCTCAACATGGCGCAAGAACCCATAGCAGCGGAGCACTAA 1416 0.4251 MILMMDPSNLLPADGLEEVHQNGVHDELSNSGKDDIASNVDPGVTKIIETAATNGNFENFIQYDSTATDYSSKEGSNDNIDVNNVTISKEEEAKIIDRTGQLKVGKGPAKNKNAKPPSPRGSHVSSVKKNKDGKDEEVASAVSNGTFALDSHPRQPIKNRSLSDKQARLSKHPGKSNAATSEESMEKSRPRLLKKEPLDNLQGETESSSPTAEDAKPRRVGALPKYGFSFKCDERAERRKEFYTKLEEKIHAKEVEESNLQAKTKETQEAEIKMLRKSLGFKATPMPSFYQEPPPPRVELKKMPTTRAKSPKLGRKKSSTNSEPEGNLSNNARQGRLSLDEKVSQTNPTKGISPVHQKKPQRKSLPPQLTSEKTRSSNSASVRTSSKAVNGGKNSLSSVTTEVTTLSNPREEEKVEIAAATEENNVLLNETSKALPLNIEPDETESPVNGDLVIQEKPQLNMAQEPIAAEH* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0573 471 MobiDBLite consensus disorder prediction 157 171 - -
Gso4g0573 471 MobiDBLite consensus disorder prediction 363 406 - -
Gso4g0573 471 Pfam Targeting protein for Xklp2 (TPX2) domain 228 299 IPR027329 -
Gso4g0573 471 MobiDBLite consensus disorder prediction 182 201 - -
Gso4g0573 471 MobiDBLite consensus disorder prediction 276 412 - -
Gso4g0573 471 Coils Coil 243 273 - -
Gso4g0573 471 PANTHER PROTEIN WVD2-LIKE 4 5 461 IPR044833 GO:0008017
Gso4g0573 471 Coils Coil 410 430 - -
Gso4g0573 471 MobiDBLite consensus disorder prediction 97 224 - -
Gso4g0573 471 MobiDBLite consensus disorder prediction 315 354 - -
Gso4g0573 471 PANTHER PROTEIN WVD2-LIKE 5-RELATED 5 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0573 Gso-Chr4 5550587 5556644 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0573 - - gsj:114408962 897.116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0573 4 5550587 5556644 Gso6g0570 6 5286446 5293195 GST
Gso14g1006 14 14613663 14619707 Gso4g0573 4 5550587 5556644 PCT
Gso17g1792 17 35118337 35124386 Gso4g0573 4 5550587 5556644 PCT
Gso4g0573 4 5550587 5556644 Gso14g1006 14 14613663 14619707 PCT
Gso4g0573 4 5550587 5556644 Gso17g1792 17 35118337 35124386 PCT