Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1792 ATGGATCCAATTAACCTTTTACCTGCTGATGGGGTTGAAGTAGTCCACCAAAATGGTGTTCATGATGAACCTTCAAATTCTGGAGACGATGATGGCGTTTCATATGATTTAGACCCCAGTGTTACTGAAACTGCTGCAACTGTAGCTCTAAATGGGAACTTCGATAATTTCCATCAGTCAGATAGTGCTGCATCTGATAACTCATTTGTGGCAGAAATCAAAGAATCAAATGACAACATTGATGGCACTAATATGACCATTCCTAAGGAAGAGGAAGTTAAAATATCAGATCAAACAAAGCAATCAAGAGCACCAAAGGGTCTTGTCAAGAACAAGAATGCAAAGGCTCCAAGTTCCAGTGGTGTTCATGCAAGTTTGGTGAATAAGAGCAAAATTGGAAAAGATAAAGAAGCATCTTCATCTGTTTCAAATGGTACTTCAGCTTTAGACTCTCGCCCAAGACAGTCTACTAAAAGCAGCAGATCTTTCAATGACCGGCAGACACAATTGTCTAAGCCCAAGCACCCTTCGAAGTCTGATGCAACATCTTCTGAAGTATCAGTGGAGAAGACAAAACCAAAATCATCGAGAAAAGAACCCATTGATAAAGTTCAAGGAGAAGCAGAATCTTCCTTTTCCAACACAGAAGATGCCAAACCTCAAAGGGTGGGAACACTTCCAAATTATGGATTCAGTTTTAAGTGTGGTGAACGAGCTGAGAGAAGGAGAGAGTTCTACAATAAGCTTGAGGAGAGGATTCAGGCAAAGGAGGTGGAGAAGAGTAACTTGCAAGCAAAATCCAAGGAAACCCAAGAAGCCGAGATTAAGATGCTTAGGAAGAGTCTGAATTTTAAAGCAACTCCAATGCCAAGTTTTTACCAGGAGCCTGCTCCTGCTAAGGCGGAGTTAAAGAAGATACCAACTACAAGAGCAAAATCACCCAAGCTCGGTCGTAAGAAGAGTTCAGCAAATTCAGAGTCAGATGGAAACAACAGCAGCAGTTCACGACTAGCTCGTTTAAGTCTGGATGAGAAAGTGTCAGAGAGTAACCTCACTAAGGGACCTACTCCTCCTGTCCATCAAAAGAAGCCACAACGAAGATCTCTTCCTGCTCGGCTGGCCCCTGAAAGGAACAGTGTATCAAATTCAAGGACTGCACCAACTTCATCCAAGGCTATCAAAGATGAAAAGTCCTCCTTGTCTAGTGCTGCTAAAAAACATACCAACTTATCCAATGCTACAGGAGAGGAGAAAGCCAAGACGATTGCAGCAAATGAAGAGAAAAGTACCTTGTCCAGTGAAACAAGTGATGCTGTGCTGCTGAATGTGGTTCTTCCTTCAGATAAGCCAAGTGAAGAAGTGTCTCATGTGAATGGTGACATAGCAGTTGAAGAGAATCCTCAGCTCTCCTTGGCAAAAGAACCTATCATGGCAGCGCATTGA 1443 0.4255 MDPINLLPADGVEVVHQNGVHDEPSNSGDDDGVSYDLDPSVTETAATVALNGNFDNFHQSDSAASDNSFVAEIKESNDNIDGTNMTIPKEEEVKISDQTKQSRAPKGLVKNKNAKAPSSSGVHASLVNKSKIGKDKEASSSVSNGTSALDSRPRQSTKSSRSFNDRQTQLSKPKHPSKSDATSSEVSVEKTKPKSSRKEPIDKVQGEAESSFSNTEDAKPQRVGTLPNYGFSFKCGERAERRREFYNKLEERIQAKEVEKSNLQAKSKETQEAEIKMLRKSLNFKATPMPSFYQEPAPAKAELKKIPTTRAKSPKLGRKKSSANSESDGNNSSSSRLARLSLDEKVSESNLTKGPTPPVHQKKPQRRSLPARLAPERNSVSNSRTAPTSSKAIKDEKSSLSSAAKKHTNLSNATGEEKAKTIAANEEKSTLSSETSDAVLLNVVLPSDKPSEEVSHVNGDIAVEENPQLSLAKEPIMAAH* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1792 480 MobiDBLite consensus disorder prediction 85 99 - -
Gso17g1792 480 MobiDBLite consensus disorder prediction 318 356 - -
Gso17g1792 480 MobiDBLite consensus disorder prediction 207 221 - -
Gso17g1792 480 Coils Coil 246 273 - -
Gso17g1792 480 MobiDBLite consensus disorder prediction 74 232 - -
Gso17g1792 480 MobiDBLite consensus disorder prediction 137 184 - -
Gso17g1792 480 MobiDBLite consensus disorder prediction 185 205 - -
Gso17g1792 480 Pfam Targeting protein for Xklp2 (TPX2) domain 231 302 IPR027329 -
Gso17g1792 480 PANTHER PROTEIN WVD2-LIKE 5-RELATED 1 470 - -
Gso17g1792 480 MobiDBLite consensus disorder prediction 287 436 - -
Gso17g1792 480 MobiDBLite consensus disorder prediction 17 37 - -
Gso17g1792 480 MobiDBLite consensus disorder prediction 375 418 - -
Gso17g1792 480 PANTHER PROTEIN WVD2-LIKE 4 1 470 IPR044833 GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1792 Gso-Chr17 35118337 35124386 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1792 - - gmx:100786958 902.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1006 14 14613663 14619707 Gso17g1792 17 35118337 35124386 GST
Gso17g1792 17 35118337 35124386 Gso4g0573 4 5550587 5556644 PCT
Gso17g1792 17 35118337 35124386 Gso6g0570 6 5286446 5293195 PCT
Gso4g0573 4 5550587 5556644 Gso17g1792 17 35118337 35124386 PCT
Gso6g0570 6 5286446 5293195 Gso17g1792 17 35118337 35124386 PCT