Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0562 ATGAGAATCGAGCTAGGCTACGTTGTTATGGGTGAGAGAAGTTTGATGATTGTTTCTCACGAAATCCCTCAACGATCTCTCAGCAGTTTTTCCTACGACAGGCTTCCTTCCCAAACGCTCATCCTCTCCATCCTCAAATTGGATGCCTCTTCCTTCCATGTTGAAGTTGCAAATGCAGCAACTGTTGCAGAACTTAAGCAGGCGGTGGAGGCAGTTTTCTCTCACGTGCCTCAGAAGGGCCCGGGGAAAATATTATGGCCACTTGTTTGGCGGCAATTTTGCTTATGCTATCAAGGACAGAAATTAGTATCAGAAATGGATTATATTAGAGATTATGGCATCAAGGATGGTGACCAACTTCATTTTGTGTACCATGTATCTGACACTTGCAGTTTCGAGAGAAAGCAGTCCAAGAAACGAGTTGTCAATTTGAAACAGCACATGAGGTCATCATCAAAAGTGAATAGATATCAACAGAAAGAACATAACGATGACAAAGACATTGATTTGGATGATATAGTCATAGAGAATGCGAGGATCCAGCATTGCAATAATGCAGAAGAAAATGGAGGAGGAAAGCGAAGCTTAGCTGGCATTTTAGCAGGGTTGTTCTCACACAGTCGGTTGGCAGTTGTGAGCAGAGCTAGAATTGAGAGCAGGATTTGCTGCTCAATGATGGCTAGATTTATAGTGAGCAGTTTTAGGAAAATTAGAAGAATTTTACGCTATTGCAGGAGGCAGCATTACTCTCGGAGACCCACATGGGCAGAATATTGA 777 0.4273 MRIELGYVVMGERSLMIVSHEIPQRSLSSFSYDRLPSQTLILSILKLDASSFHVEVANAATVAELKQAVEAVFSHVPQKGPGKILWPLVWRQFCLCYQGQKLVSEMDYIRDYGIKDGDQLHFVYHVSDTCSFERKQSKKRVVNLKQHMRSSSKVNRYQQKEHNDDKDIDLDDIVIENARIQHCNNAEENGGGKRSLAGILAGLFSHSRLAVVSRARIESRICCSMMARFIVSSFRKIRRILRYCRRQHYSRRPTWAEY* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0562 258 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 15 250 IPR039690 GO:0000398|GO:0005689
Gso6g0562 258 Pfam Ubiquitin-like domain 42 125 IPR040610 -
Gso6g0562 258 PANTHER UBIQUITIN-LIKE SUPERFAMILY PROTEIN 15 250 - -
Gso6g0562 258 SUPERFAMILY Ubiquitin-like 36 129 IPR029071 -
Gso6g0562 258 CDD Ubl_SNRNP25 40 125 IPR040610 -
Gso6g0562 258 Gene3D - 35 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0562 Gso-Chr6 5209028 5211602 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0562 - - gmx:100790105 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0566 4 5477480 5480024 Gso6g0562 6 5209028 5211602 GST
Gso14g1001 14 14475389 14478947 Gso6g0562 6 5209028 5211602 PCT
Gso6g0562 6 5209028 5211602 Gso14g1001 14 14475389 14478947 PCT