Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1001 ATGGCCACCACCGAGCACGAAAAACAGTTAATAGTGGCCAACCCTAACCCTAACCCTAACACCAAGACCCCTCGCCGATCCTCCTCCTCCTCCTCCTCGCTCGCCATTTTCGCGAGGAAAAGCTTCTTCTACGACAGGCTCCCCTCCCAACCCCTCAGACTCACCGTCCTCAAACTCGACGGTTCATGCTTCCATATTCAAGTTTCGAAGATGGCCACCGTTGCGGAACTGAAGGACGCGGTGGAGGCCGTGTTTAGTCACGTGCCTCACAAGGGGCCAGCAAAAATTTCATGGGCGCATGTTTGGGGGCAATTTTGTTTATGCTATGATGGACAGAAGCTAGTTACGGAGAAGGATTATCTTCGAAATTATGGCATCAAGGATGGTGACCAGCTCCGTTTCATCCGCCATGTCACAAACAATTGCTGTGTTCAAAGAAAGCGGTTGAAGAAAAGAGTTGTCTATTTGAAACAACACAGGAGGTCATTGCAAGTGGATGGCCATCTACCGAAAGGAAATTGTGATGATAATGACATTGGTTCTGATGATGAAGCCACAGATAGTGGGAAGATCAAGCACCATATTGAAGAAGAGGAAGAAGAAGAAGAAAGGGAAGAAGAGTGCGTTGGAAAGAACAAATTAGCTGGCTTTTTGGGAGACTTGTTCTCATACACTCCACTAGCAGTTGTGAGAAGAACTAGAACTAAAAGCAGGATTTGGCCAACCACTATGCCCAAATGTTTACTTGGTAGTCTTCGAAAGATTAGAAGTATCGTATGCTTTGGCAGGAGGAGGCACTATTCTCGGAGACTTCCATGGAGACCGCATTAA 831 0.4705 MATTEHEKQLIVANPNPNPNTKTPRRSSSSSSSLAIFARKSFFYDRLPSQPLRLTVLKLDGSCFHIQVSKMATVAELKDAVEAVFSHVPHKGPAKISWAHVWGQFCLCYDGQKLVTEKDYLRNYGIKDGDQLRFIRHVTNNCCVQRKRLKKRVVYLKQHRRSLQVDGHLPKGNCDDNDIGSDDEATDSGKIKHHIEEEEEEEEREEECVGKNKLAGFLGDLFSYTPLAVVRRTRTKSRIWPTTMPKCLLGSLRKIRSIVCFGRRRHYSRRLPWRPH* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1001 276 Gene3D - 47 145 - -
Gso14g1001 276 MobiDBLite consensus disorder prediction 167 202 - -
Gso14g1001 276 CDD Ubl_SNRNP25 52 137 IPR040610 -
Gso14g1001 276 MobiDBLite consensus disorder prediction 1 31 - -
Gso14g1001 276 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 3 273 IPR039690 GO:0000398|GO:0005689
Gso14g1001 276 MobiDBLite consensus disorder prediction 9 31 - -
Gso14g1001 276 SUPERFAMILY Ubiquitin-like 47 143 IPR029071 -
Gso14g1001 276 Pfam Ubiquitin-like domain 52 138 IPR040610 -
Gso14g1001 276 MobiDBLite consensus disorder prediction 167 198 - -
Gso14g1001 276 PANTHER - 3 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1001 Gso-Chr14 14475389 14478947 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1001 - - gmx:100819176 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1001 14 14475389 14478947 Gso14g1001 14 14475389 14478947 ECH
Gso14g1001 14 14475389 14478947 Gso4g0566 4 5477480 5480024 PCT
Gso14g1001 14 14475389 14478947 Gso6g0562 6 5209028 5211602 PCT
Gso4g0566 4 5477480 5480024 Gso14g1001 14 14475389 14478947 PCT
Gso6g0562 6 5209028 5211602 Gso14g1001 14 14475389 14478947 PCT