Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0566 ATGGGTGAGAGAAGGTTGATGATTGTTTCTCACGAAATCCCTCAGCGATCTCTCAGCATGCACTACGTAGATACCAGTTTTTTCAACGATAGGTTTCATTCCGAAACGCTCATCCTCTCCATCCTCAAATTGGATGCCTCTTCCTTCCATGTTGAAGTTGCAAATGCAGCAACTGTTGCAGAACTTAAGCAAGCGGTGGAGGCAGTTTTCTGTCGCGTGCCTCAGAAGGGACCGGGAAAAATATTATGGCCACTTGTCTGGCGACAATTCTGCTTAAGCTATCAAGGACAGAAATTAGTCTCGGAATCGGATTATATTAGAGATTTTGGCATCGAGGATGGTGACCAGCTTCATTTCGTGCACCATGTATCTGACACTTGCAGTTTCGAGGGAAAGCAGTCCAAGAAACAAGCTGTCAATTTGAAACAACACAGGAGGTCATCGTCAAAAGTCAATAGATATCAACAGAAAGAACATAACGATGACAACGACATTGGTTTGCATGATATAGTCATAGAGAATGCGAAGATCCGGAATTGCAATAATGCAGAAGAAAATGGAGGAAAGCTAAGCTTACCTGGCTTTTTGGGAGGGTTGTTCTCACACAGCCGGCTGGCAGTTGTGAGCAGAGCTAGAATTGAGGGCAGGATTTGCTGCTCAATGATGCTTAGATGTATAGTGAGCAATTTTAGAAAAATTACAAGAATTTTACGCTATTGCAGAAGGCAGCATTACTCTCGGAGACCCACATGGAGAGAATATTGA 765 0.434 MGERRLMIVSHEIPQRSLSMHYVDTSFFNDRFHSETLILSILKLDASSFHVEVANAATVAELKQAVEAVFCRVPQKGPGKILWPLVWRQFCLSYQGQKLVSESDYIRDFGIEDGDQLHFVHHVSDTCSFEGKQSKKQAVNLKQHRRSSSKVNRYQQKEHNDDNDIGLHDIVIENAKIRNCNNAEENGGKLSLPGFLGGLFSHSRLAVVSRARIEGRICCSMMLRCIVSNFRKITRILRYCRRQHYSRRPTWREY* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0566 254 Gene3D - 32 130 - -
Gso4g0566 254 MobiDBLite consensus disorder prediction 138 160 - -
Gso4g0566 254 CDD Ubl_SNRNP25 37 122 IPR040610 -
Gso4g0566 254 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 3 246 IPR039690 GO:0000398|GO:0005689
Gso4g0566 254 PANTHER UBIQUITIN-LIKE SUPERFAMILY PROTEIN 3 246 - -
Gso4g0566 254 Pfam Ubiquitin-like domain 39 123 IPR040610 -
Gso4g0566 254 SUPERFAMILY Ubiquitin-like 34 125 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0566 Gso-Chr4 5477480 5480024 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0566 - - gmx:100781177 510.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0566 4 5477480 5480024 Gso6g0562 6 5209028 5211602 GST
Gso14g1001 14 14475389 14478947 Gso4g0566 4 5477480 5480024 PCT
Gso4g0566 4 5477480 5480024 Gso14g1001 14 14475389 14478947 PCT