Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0530 ATGCTGCGCAAGCTTGTGTCAGGGCCACGCAAGAACAAGCCTGGCACAGTTCCCGTTCACCTCAACGTCTATGATCTCACCCCAATCAACGGCTATGCCTATTGGCTTGGCCTTGGAGTCTACCATTCTGGGGTTCAAGTTCATGGATTGGAATATGGTTTTGGTGCGCACGAGCACGACACAACGGGGATTTTCGAAGTCCAACCCAAACACTGCCCTGGGTTCACTTTCAGAAAGTCAATTTTCATCGGAACAACAGATCTGGGTCCGAAGGATGTTCGAGCATTCATGGAGAAGCTGGCTCAGGATTACTCCGGCAACACCTATCATCTCATTTCCAAGAATTGCAACCATTTCTGTAACGATGTTTGTCTCAAATTGACCGGAAAGTCAATCCCTCGTTGGGTCAACCGGCTTGCTCGACTTGGTCTTCTGTGCAACTGTGTTCTCCCACCTGGCCTAAATGACACAAAGGTTTCACAAGCTGCATCAGACAGGGTTCAAGAAGGTGAAAAGAGGAAAATAAGAAGCCAGTCCTGCAGGTACGAGGGTTCCTCCAATCCTTCATCGTCGCAACGTTCAGCAATTAAAAGTAGTAGTAGCCAAAGGCATTGCCATCCTCCATCTTCATCTTTGATTAATGCTGCTTCAGCTTCAACCTTAACAGTGAAGTAA 675 0.477 MLRKLVSGPRKNKPGTVPVHLNVYDLTPINGYAYWLGLGVYHSGVQVHGLEYGFGAHEHDTTGIFEVQPKHCPGFTFRKSIFIGTTDLGPKDVRAFMEKLAQDYSGNTYHLISKNCNHFCNDVCLKLTGKSIPRWVNRLARLGLLCNCVLPPGLNDTKVSQAASDRVQEGEKRKIRSQSCRYEGSSNPSSSQRSAIKSSSSQRHCHPPSSSLINAASASTLTVK* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0530 224 MobiDBLite consensus disorder prediction 164 224 - -
Gso6g0530 224 MobiDBLite consensus disorder prediction 180 224 - -
Gso6g0530 224 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Gso6g0530 224 MobiDBLite consensus disorder prediction 165 179 - -
Gso6g0530 224 Gene3D PPPDE domains 12 173 IPR042266 -
Gso6g0530 224 PANTHER DESUMOYLATING ISOPEPTIDASE 2 222 IPR008580 GO:0008233
Gso6g0530 224 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 2 222 - -
Gso6g0530 224 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Gso6g0530 224 Pfam PPPDE putative peptidase domain 18 150 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0530 Gso-Chr6 4902537 4904583 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0530 K22763 - gmx:100306675 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0536 4 5166200 5168241 Gso6g0530 6 4902537 4904583 GST
Gso14g0965 14 12997726 13001477 Gso6g0530 6 4902537 4904583 PCT
Gso17g1830 17 36673792 36676947 Gso6g0530 6 4902537 4904583 PCT
Gso6g0530 6 4902537 4904583 Gso14g0965 14 12997726 13001477 PCT
Gso6g0530 6 4902537 4904583 Gso17g1830 17 36673792 36676947 PCT