Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0536 ATGCTGCGCAAGAACAAGCTTGGCACCGTTCCCGTTCACCTCAACGTCTATGATCTCACCCCAATTAATGGCTACGCCTATTGGTTTGGCCTTGGACTCTACCATTCTGGGGTTCAAGTTCATGGGCTGGAATATGGATTTGGTGCGAACGAGCACGACACAACGGGGATTTTCCAAGTTCAACCGAAACACTGTCCTGGGTTCACCTTCAGAAAGTCAATTTTCATCGGAACAACAGATCTGGGTGCCAAGGATGTTCGAGCATTCATGGAGAAGCTAGCTCAAGATTATTCTGGCAATACCTACCATCTCATTTCCAAGAATTGCAACCATTTCTGTAACGATGTTTGTCTCAAATTGACCGGAAAGTCAATCCCTCGTTGGGTCAACCGGCTTGCTCGACTTGGTCTTCTGTGCAACTGTGTTCTCCCCCCTGACCTAAATGACACAAAGGTTTCACAAGTTGCATCAGACAGGGTTCAAGAAGGTGAAAAGAGGAAAATTAGAAGCCATTCCTGTAGGTACGAAGGTTCCTCCAATCCTTCATCGTCTCGACGTTCAACAATTAAGAGTAGTAGTAGCCAAAGATATTGCCTTCCTCCATCTTCTTCTTTGATTAATGCTGCTTCAGCTTCAACCTTAACAGTGAAGTAA 654 0.4541 MLRKNKLGTVPVHLNVYDLTPINGYAYWFGLGLYHSGVQVHGLEYGFGANEHDTTGIFQVQPKHCPGFTFRKSIFIGTTDLGAKDVRAFMEKLAQDYSGNTYHLISKNCNHFCNDVCLKLTGKSIPRWVNRLARLGLLCNCVLPPDLNDTKVSQVASDRVQEGEKRKIRSHSCRYEGSSNPSSSRRSTIKSSSSQRYCLPPSSSLINAASASTLTVK* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0536 217 MobiDBLite consensus disorder prediction 170 198 - -
Gso4g0536 217 Pfam PPPDE putative peptidase domain 11 144 IPR008580 GO:0008233
Gso4g0536 217 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 3 215 - -
Gso4g0536 217 Gene3D PPPDE domains 7 165 IPR042266 -
Gso4g0536 217 ProSiteProfiles PPPDE domain profile. 10 147 IPR008580 GO:0008233
Gso4g0536 217 PANTHER DESUMOYLATING ISOPEPTIDASE 3 215 IPR008580 GO:0008233
Gso4g0536 217 MobiDBLite consensus disorder prediction 174 198 - -
Gso4g0536 217 SMART DUF862_2a 10 148 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0536 Gso-Chr4 5166200 5168241 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0536 K22763 - gmx:100820198 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0536 4 5166200 5168241 Gso6g0530 6 4902537 4904583 GST
Gso14g0965 14 12997726 13001477 Gso4g0536 4 5166200 5168241 PCT
Gso17g1830 17 36673792 36676947 Gso4g0536 4 5166200 5168241 PCT
Gso4g0536 4 5166200 5168241 Gso14g0965 14 12997726 13001477 PCT
Gso4g0536 4 5166200 5168241 Gso17g1830 17 36673792 36676947 PCT