Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1830 ATGTTGTGTAAACTGGTTCCGGTGCCGCGCAAGAAAAAACCCGGTTTGAACCCGGTTTACCTTAACGTCTACGACCTAACCCCAATTAACGGTTACGCTTATTGGCTTGGCCTCGGAGTTTACCATTCTGGTGTTCAAGTTCATGGGGTTGAATATGGATTTGGAGCACACGAACGCGACACGACTGGGATTTTTGAAGTGGAGCCTAGACACTGTCCTGGATTCACCTTCAGGAAATCAATTTTCATTGGATCAACGGATATGGGGCCGAAGGATGTTCGCGCGTTCATGGAGAGGCTGGCTGAAGAGTATTCTGGGAACACCTACCACCTTATCCAGAAAAATTGCAACCACTTCTGCGAAGATGTTTGTGTCAGATTAACGGGAAAGTCTATTCCTCGATGGGTGAATCGGCTTGCTAGACTCGGTTTTCTCTGCAACTGTGTTCTTCCACCTAGCCTAAATGAAACAAAGGTTCGCCAAGTTACAATAGACAGGGTTCAAGAAGGAGGAGAAAAGAAGAAAATGAGAAGCCAGTCGAGCAGGTACGAGGCTTCACCCAATCCTACATTGTCCAGTAGCCAAAGACATTGCCTTCCTCCATCTTCTGTAATTAATGCTTCTCCGTCCTCAACCTTAACCGTAAAGTAA 651 0.4639 MLCKLVPVPRKKKPGLNPVYLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYGFGAHERDTTGIFEVEPRHCPGFTFRKSIFIGSTDMGPKDVRAFMERLAEEYSGNTYHLIQKNCNHFCEDVCVRLTGKSIPRWVNRLARLGFLCNCVLPPSLNETKVRQVTIDRVQEGGEKKKMRSQSSRYEASPNPTLSSSQRHCLPPSSVINASPSSTLTVK* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1830 216 PANTHER DESUMOYLATING ISOPEPTIDASE 2 214 IPR008580 GO:0008233
Gso17g1830 216 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Gso17g1830 216 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Gso17g1830 216 Gene3D PPPDE domains 13 170 IPR042266 -
Gso17g1830 216 MobiDBLite consensus disorder prediction 168 216 - -
Gso17g1830 216 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 2 214 - -
Gso17g1830 216 MobiDBLite consensus disorder prediction 181 216 - -
Gso17g1830 216 Pfam PPPDE putative peptidase domain 18 150 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1830 Gso-Chr17 36673792 36676947 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1830 K22763 - gmx:100786432 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0965 14 12997726 13001477 Gso17g1830 17 36673792 36676947 GST
Gso17g1830 17 36673792 36676947 Gso4g0536 4 5166200 5168241 PCT
Gso17g1830 17 36673792 36676947 Gso6g0530 6 4902537 4904583 PCT
Gso4g0536 4 5166200 5168241 Gso17g1830 17 36673792 36676947 PCT
Gso6g0530 6 4902537 4904583 Gso17g1830 17 36673792 36676947 PCT