Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0419 ATGGCTTCAGAAGCATATGATCCTGTGCTGGGTCTAACCCCAGAGGAATTCACCGAACTCGAAAGCACCATCAACACGCACCACAAGTTCGAGGCTTCCCCTGAAATCTGCAGCTCCATCATAGCGCAGCGCATCGACGCGCCGGCGCACACGGTCTGGCCCCTCGTCCGGAGCTTCGAGAACCCGCAGAAGTACAAGCACTTCGTCAAGAGCTGCAACATGCGCTCCGGCGACGGCGGCGTCGGCAGCATCAGGGAAGTCACCGTCGTCTCGGGCCTCCCCGCCTCCACCAGCACCGAGCGCCTCGAGATCCTCGACGACGACAACCACCTCCTCAGCTTCCGCGTCGTCGGCGGCGAGCACCGCCTCCACAACTATCGCTCCGTCACCTCCGTCAACGAGTTCAAGAGACCCGACAACGGTAAGGTTTACACCATTGTGTTGGAGTCTTACGTCGTCGACATACCCGAAGGAAACACCGGTGTTGATACTAAGATGTTTGTTGACACTGTCGTTAAGCTTAACCTTCAGAAACTCGGCGAGGTCGCTATGGCTACCAACTAA 564 0.578 MASEAYDPVLGLTPEEFTELESTINTHHKFEASPEICSSIIAQRIDAPAHTVWPLVRSFENPQKYKHFVKSCNMRSGDGGVGSIREVTVVSGLPASTSTERLEILDDDNHLLSFRVVGGEHRLHNYRSVTSVNEFKRPDNGKVYTIVLESYVVDIPEGNTGVDTKMFVDTVVKLNLQKLGEVAMATN* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0419 187 CDD PYR_PYL_RCAR_like 37 183 - -
Gso6g0419 187 PANTHER - 14 186 - -
Gso6g0419 187 Pfam Polyketide cyclase / dehydrase and lipid transport 43 181 IPR019587 -
Gso6g0419 187 Gene3D - 2 187 IPR023393 -
Gso6g0419 187 PANTHER ABSCISIC ACID RECEPTOR PYL2-LIKE 14 186 - -
Gso6g0419 187 SUPERFAMILY Bet v1-like 38 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0419 Gso-Chr6 3888096 3888739 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0419 K14496 - gmx:100805641 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0437 4 4132931 4133663 Gso6g0419 6 3888096 3888739 GST
Gso14g0827 14 9081653 9083027 Gso6g0419 6 3888096 3888739 PCT
Gso17g1949 17 38658857 38660007 Gso6g0419 6 3888096 3888739 PCT
Gso6g0419 6 3888096 3888739 Gso14g0827 14 9081653 9083027 PCT
Gso6g0419 6 3888096 3888739 Gso17g1949 17 38658857 38660007 PCT