Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1949 ATGATAACTTTGCCTCATCACTCAACCCAAAAATCATCAAATCATAAGTTCGTAACACCCCAAAATTACATGGCCTCGGAAACCCACCATCATGTGGAAGGCCTAACACCCGAGGAACTAACCCAACTTGAACCTATCATAAAAAAATACCATCTATTCGAAGCATCTTCCAACAAATGTTTTTCCATAATAACACACCGGATTGAAGCACCCGCGAGCAGCGTGTGGCCCTTGGTCCGGAACTTCGACAACCCTCAGAAGTACAAACACTTCATCAAAGGGTGCAACATGAAAGGGGATGGCAGCGTTGGAAGTATTAGGGAAGTAACTGTGGTCTCGGGCCTCCCGGCCTCAACCAGTACCGAGAGGCTCGAGATTTTGGACGATGACAAACACGTCCTAAGTTTTAGGGTCGTTGGCGGCGAACACCGACTCCAAAACTATCGTTCAGTCACATCCGTGAACGAATTTCACAAAGAGGGTAAGGTTTATACTATTGTTTTGGAATCTTACATCGTAGATATACCTGAAGGGAATACGGAGGAAGATACCAAGATGTTTGTTGACACCGTGGTGAAACTCAATCTTCAAAAACTTGGGGTCGTGGCCATGGCTTCATCAATGAATGGACGATAA 636 0.4528 MITLPHHSTQKSSNHKFVTPQNYMASETHHHVEGLTPEELTQLEPIIKKYHLFEASSNKCFSIITHRIEAPASSVWPLVRNFDNPQKYKHFIKGCNMKGDGSVGSIREVTVVSGLPASTSTERLEILDDDKHVLSFRVVGGEHRLQNYRSVTSVNEFHKEGKVYTIVLESYIVDIPEGNTEEDTKMFVDTVVKLNLQKLGVVAMASSMNGR* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1949 211 PANTHER - 36 206 - -
Gso17g1949 211 SUPERFAMILY Bet v1-like 63 200 - -
Gso17g1949 211 PANTHER ABSCISIC ACID RECEPTOR PYL2-LIKE 36 206 - -
Gso17g1949 211 CDD PYR_PYL_RCAR_like 64 199 - -
Gso17g1949 211 Gene3D - 19 211 IPR023393 -
Gso17g1949 211 Pfam Polyketide cyclase / dehydrase and lipid transport 66 199 IPR019587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1949 Gso-Chr17 38658857 38660007 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1949 K14496 - gmx:100778183 379.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0827 14 9081653 9083027 Gso17g1949 17 38658857 38660007 GST
Gso17g1949 17 38658857 38660007 Gso4g0437 4 4132931 4133663 PCT
Gso17g1949 17 38658857 38660007 Gso6g0419 6 3888096 3888739 PCT
Gso4g0437 4 4132931 4133663 Gso17g1949 17 38658857 38660007 PCT
Gso6g0419 6 3888096 3888739 Gso17g1949 17 38658857 38660007 PCT