Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0437 ATGGCTTCAGAAGCATATCCTGTGCTGGGTCTAACCCCAGAGGAATTCTCGGAACTCGAAAGCATCATCAACACGCACCACAAGTTCGAACCTTCCCCTGAAATCTGCAGCTCCATCATAGCGCAGCGCATCGACGCGCCGGCACACACGGTGTGGCCCCTCGTCCGGAGCTTCGAGAACCCTCAGAAGTACAAGCACTTCGTCAAGAGCTGCAACATGCGCTCCGGCGACGGCGGCGTCGGCAGCATCCGCGAGGTCACCGTCGTGTCGGGCCTCCCCGCCTCCACCAGCACCGAGCGCCTCGAGATCCTCGACGACGACAAGCACCTCCTCAGCTTCCGCGTCGTCGGCGGCGAACACCGCCTCCACAACTACCGCTCCGTCACCTCCGTCAACGAGTTCAAGAACCCCGACAACGGTAAGGTTTACACCATTGTTTTGGAATCTTACGTCGTCGACATACCCGAAGGAAACACCGGTGTCGATACTAAGATGTTTGTTGACACTGTCGTCAAACTTAACCTTCAGAAACTCGGCGAGGTCGCTATGGCTACTACCACACTGCACTGA 570 0.5754 MASEAYPVLGLTPEEFSELESIINTHHKFEPSPEICSSIIAQRIDAPAHTVWPLVRSFENPQKYKHFVKSCNMRSGDGGVGSIREVTVVSGLPASTSTERLEILDDDKHLLSFRVVGGEHRLHNYRSVTSVNEFKNPDNGKVYTIVLESYVVDIPEGNTGVDTKMFVDTVVKLNLQKLGEVAMATTTLH* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0437 189 Gene3D - 2 189 IPR023393 -
Gso4g0437 189 CDD PYR_PYL_RCAR_like 36 182 - -
Gso4g0437 189 Pfam Polyketide cyclase / dehydrase and lipid transport 42 180 IPR019587 -
Gso4g0437 189 PANTHER ABSCISIC ACID RECEPTOR PYL2-LIKE 13 187 - -
Gso4g0437 189 PANTHER - 13 187 - -
Gso4g0437 189 SUPERFAMILY Bet v1-like 37 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0437 Gso-Chr4 4132931 4133663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0437 K14496 - gmx:100794619 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0437 4 4132931 4133663 Gso6g0419 6 3888096 3888739 GST
Gso14g0827 14 9081653 9083027 Gso4g0437 4 4132931 4133663 PCT
Gso17g1949 17 38658857 38660007 Gso4g0437 4 4132931 4133663 PCT
Gso4g0437 4 4132931 4133663 Gso14g0827 14 9081653 9083027 PCT
Gso4g0437 4 4132931 4133663 Gso17g1949 17 38658857 38660007 PCT