Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1543 ATGGGAGTTGGAGGTACATTGGAGTACTTGTCTGATCTAATGGGCAGTGGCCACCACCACCACAAGAAGAAGAAGAAGCAGTTCCAAACCGTGGAGCTAAAGGTGAGAATGGATTGTGATGGTTGTGAGCTTAAGGTCAAAAACGCTCTCTCTTCACTAAGTGGGGTGAAATCTGTGGAGATAAACCGAAAACAGCAGAAAGTTACAGTAACTGGGTATGTTGAACCAAACAAGGTGCTGAAGAAGGCCAAATCAACAGGGAAGAAGGCTGAGATTTGGCCCTATGTGCCTTACAACTTGGTGGTTCATCCATATGCAGTTCCTTCTTATGACAAGAAGGCTCCTCCTGGTTATGTGAGGAGAGTGGAGGCCCCTGCTCACACTGGAACCATCACAAGATATGAAGACCCTTACATCACCATGTTCAGTGATGACAACCCAAATGCATGCTCTATCATGTAG 462 0.461 MGVGGTLEYLSDLMGSGHHHHKKKKKQFQTVELKVRMDCDGCELKVKNALSSLSGVKSVEINRKQQKVTVTGYVEPNKVLKKAKSTGKKAEIWPYVPYNLVVHPYAVPSYDKKAPPGYVRRVEAPAHTGTITRYEDPYITMFSDDNPNACSIM* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1543 153 Gene3D - 17 94 - -
Gso5g1543 153 PANTHER - 3 153 - -
Gso5g1543 153 ProSiteProfiles Heavy-metal-associated domain profile. 37 92 IPR006121 GO:0046872
Gso5g1543 153 CDD HMA 32 91 IPR006121 GO:0046872
Gso5g1543 153 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 3 153 IPR045181 GO:0046872
Gso5g1543 153 Pfam Heavy-metal-associated domain 34 89 IPR006121 GO:0046872
Gso5g1543 153 SUPERFAMILY HMA, heavy metal-associated domain 28 94 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1543 Gso-Chr5 38844473 38845887 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1543 - - gmx:100500473 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1543 5 38844473 38845887 Gso5g1543 5 38844473 38845887 ECH
Gso5g1543 5 38844473 38845887 Gso8g1175 8 10733347 10734829 GST
Gso5g1543 5 38844473 38845887 Gso18g0170 18 1473795 1474965 PCT
Gso5g1543 5 38844473 38845887 Gso13g1452 13 30022735 30024302 PCT