Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0170 ATGGGGGTTGGAGATTACTGGTCTGATTTAATGGGAAGTGGGAATGGCAACCACCAACACAACAACAAGAACAAGAACAAGAAGCAATTACAGACCGTGGAGCTGAAGGTGATGATGGATTGTGACGGCTGTGTGCTCAAGGTTAGGAAAACTCTCTCTTCATTAGATGGAGTAGAATCGGTGGAGATAAACAGGAAGCAGCAGAAAGTAACAGTAACTGGTTATGTGGAACCAAACAAGGTCTTAAAGAAGGCCAAGTCAACAGGGAAAAAGGCTGAGATTTGGCCTTACGTGCCTTTCAACATGGTGGCTAATCCATATACTGTTCAAGCTTATGACAAGAAGGCTCCTCCGGGATATGTGAGGAGAGTGGACAACTCTGCTGCCACCATAGGAACAGTGACAACAGCATATGCAGATTCATACACCACCATGTTCAGTGATGAAAACCCAAATGCATGTTCTATCATGTAG 474 0.4451 MGVGDYWSDLMGSGNGNHQHNNKNKNKKQLQTVELKVMMDCDGCVLKVRKTLSSLDGVESVEINRKQQKVTVTGYVEPNKVLKKAKSTGKKAEIWPYVPFNMVANPYTVQAYDKKAPPGYVRRVDNSAATIGTVTTAYADSYTTMFSDENPNACSIM* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0170 157 Pfam Heavy-metal-associated domain 37 91 IPR006121 GO:0046872
Gso18g0170 157 ProSiteProfiles Heavy-metal-associated domain profile. 39 94 IPR006121 GO:0046872
Gso18g0170 157 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 5 157 IPR045181 GO:0046872
Gso18g0170 157 Gene3D - 17 96 - -
Gso18g0170 157 CDD HMA 39 93 IPR006121 GO:0046872
Gso18g0170 157 SUPERFAMILY HMA, heavy metal-associated domain 31 96 IPR036163 GO:0046872
Gso18g0170 157 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 20 5 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0170 Gso-Chr18 1473795 1474965 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0170 - - gmx:100780586 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0170 18 1473795 1474965 Gso13g1452 13 30022735 30024302 GST
Gso5g1543 5 38844473 38845887 Gso18g0170 18 1473795 1474965 PCT
Gso8g1175 8 10733347 10734829 Gso18g0170 18 1473795 1474965 PCT