Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1452 ATGGGGGTTGGAGATTATTTGTCTGATTTAATTGGAAGTGGCAATGGAAACCACCAACACAAGAACAAGAACAAGAAGCAATTACAGACCGTAGAGCTGAAGGTGATGATGGATTGTGACGGCTGTGTGCTCAAGGTTAAGAAAGCTCTCTCTTCATTAGATGGAGTAAAATCGGTGGAGATAAACAGGAAGCAGCAGAAAGTGACAGTAACCGGTTATGTGGAACCAAACAAGGTCTTAAAGAAGGCCAAGTCAACAGGGAAGAAGGCTGAGATTTGGCCTTACGTGCCATTCAACATGGTGGCTAATCCATATGCTGTTCAAGCTTATGACAAGAAAGCTCCTCCGGGATATGTGAGGAGAGTGGACAACTCTTCTGTCACCATTGGAACAGTGACAACAGCATATGCAGATCCATACACCACCATGTTCAGTGATGAAAACCCAAATGCATGTTCTATCATGTAG 468 0.438 MGVGDYLSDLIGSGNGNHQHKNKNKKQLQTVELKVMMDCDGCVLKVKKALSSLDGVKSVEINRKQQKVTVTGYVEPNKVLKKAKSTGKKAEIWPYVPFNMVANPYAVQAYDKKAPPGYVRRVDNSSVTIGTVTTAYADPYTTMFSDENPNACSIM* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1452 155 SUPERFAMILY HMA, heavy metal-associated domain 29 94 IPR036163 GO:0046872
Gso13g1452 155 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 4 155 IPR045181 GO:0046872
Gso13g1452 155 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 20 4 155 - -
Gso13g1452 155 Pfam Heavy-metal-associated domain 35 89 IPR006121 GO:0046872
Gso13g1452 155 Gene3D - 16 94 - -
Gso13g1452 155 ProSiteProfiles Heavy-metal-associated domain profile. 37 92 IPR006121 GO:0046872
Gso13g1452 155 CDD HMA 37 91 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1452 Gso-Chr13 30022735 30024302 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1452 - - gmx:100778653 292.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0170 18 1473795 1474965 Gso13g1452 13 30022735 30024302 GST
Gso5g1543 5 38844473 38845887 Gso13g1452 13 30022735 30024302 PCT
Gso8g1175 8 10733347 10734829 Gso13g1452 13 30022735 30024302 PCT