Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1273 ATGGCGGCGGAAAAGGTTGTTGAGATGGTGGCATTGGAGTCTTTGGGAAAAGGGTTCGATTTGGCCAGCGATTTTCGGTTGCGGTTCGCAAAGGGAATTCATGGAGAGAGGTTGGTGGTGCTTGATGAACAGAACAAGAGGGATATTTTGATTCCTGGAACTGGAGGAGTTACCATTAAAGGGGTTTCTGAGGATATTCGTTGTGATAAAGGGGATAGAATACGCTTCAAGTCTGATGTACTTGAATTCAACCAGATGTCTGAGTTGCTTAATCAGAAATCAGCAGTGCAAGGGAAAGTTCCTTCTGGCTATTTTAATGCGCTCTTTGATTTGAGTGGGGATTGGTTTCGTGATGCTGCTGACACCAAGTACCTTGCTTTTGATGGGTATTTCATTTCACTCTACTATTTGCACCTCACTGCTACTCCACTCATACTGCAAGAGGAGGTTAAGAAGTCTGTTCCGGCTCAGTGGGATCCGGCTTCGTTGTCTAGGTTCATCCAGACATATGGTACACACATAATAGTGGGTATGGCTGTAGGAGGTCAAGATGTAATATGTGTCAAACAAAAACATTCTTCAAAGATTCCTCCTGGTGATCTCAGAAGACATTTAGAGGATCTTGGAGATTTTTTATTCTCAGATGTCAGAAGCCCTTCTTTACTACAGAGGAAGACAGCAGATGGAAAACAGAAGATCCCCGAGGTCTTTAACCGTGTGATGCAATCAAACACAATGCAGTTCACTAGTATTTCAGAAACATCAAGCAAGGATGGCCTCACTATTATTTGCTCAAAAAGAGGAGGAGATATGTTCAAGCACAGTCACTCAATTTGGCTTCAGACAGTGCCGTCTAACCCTGAAGCAATCCTCTTCAAGTTTGTTCCAATTTCCTCTCTTCTGACAGGAATTCCTGGAAGTGGATATCTTAGTCATGCAATCAATCTGTATCTACGCTATAAGCCTTCTCCTGGAGATTTACAGTACTTTCTCGAGTTTCAAATTCCAAGGCAATGGGCACCCATGTTTTGCGAGCTGCCTCTCAGGCATCAGAATAGAAAGACTGCTTCTCCTTCCCTGCAATTTAGTTTCATGGGTCCAAAGCTTCATATAATCTCTACACAGGTGGTAAGTGAACAAAAACCTGTGGTTGGCATGCGCATGTACTTGGAGGGCAGGAAATGTGACAGACTTGCTTTACATATAAACCATCTTTCAAGCCTCCCAAATAAAATGATCCTCTCTTCAGGAACCTCAACCTTGAGTACACCATCGATGTGGCGAGGATCTGATGATAATGAATCCAGTGATCAATTTCTGGAACGAATCAGATGGAAGAGATTCTCAAATGTGTGCACAGCAGTGGTTAAGCATGATCCTAACTGGTTGAATAATTCTGGAGGTGTTTATATTGTAACAGGTGCACAACTCCTTAGCAAAGGGAGCTGGCCAAGGAATGTGCTTCATCTGCGGCTTCTCTTTGCTCATACACCTAATTGCAGTATCCGGAAGTCAGAGTGGACTGCTGCACCAGAGGCTTCAAGAAAATCATCTTTTCTCACAAATTTGAGCACAACATTTTCGTTCACACAGCACGGTAACACTGGTCCTCCAAAACAGGCTCCAACTGTACTTAACTCTGGAGTTTATCCAGATGGTCCACCTGTGCCAGTTCGTGCCGGTAAACTACTTAAATATGTGGAGACAGCTGAGGTTGTGCGAGGCCCACATGATGCTCCTGGCCATTGGTTGGTAACAGCTGCTAAGCTTGTGACTGATGGTGGTAAGATTGGATTACAAGTGAAGTTTGCATTGTTAGATTATTGGTGA 1830 0.4372 MAAEKVVEMVALESLGKGFDLASDFRLRFAKGIHGERLVVLDEQNKRDILIPGTGGVTIKGVSEDIRCDKGDRIRFKSDVLEFNQMSELLNQKSAVQGKVPSGYFNALFDLSGDWFRDAADTKYLAFDGYFISLYYLHLTATPLILQEEVKKSVPAQWDPASLSRFIQTYGTHIIVGMAVGGQDVICVKQKHSSKIPPGDLRRHLEDLGDFLFSDVRSPSLLQRKTADGKQKIPEVFNRVMQSNTMQFTSISETSSKDGLTIICSKRGGDMFKHSHSIWLQTVPSNPEAILFKFVPISSLLTGIPGSGYLSHAINLYLRYKPSPGDLQYFLEFQIPRQWAPMFCELPLRHQNRKTASPSLQFSFMGPKLHIISTQVVSEQKPVVGMRMYLEGRKCDRLALHINHLSSLPNKMILSSGTSTLSTPSMWRGSDDNESSDQFLERIRWKRFSNVCTAVVKHDPNWLNNSGGVYIVTGAQLLSKGSWPRNVLHLRLLFAHTPNCSIRKSEWTAAPEASRKSSFLTNLSTTFSFTQHGNTGPPKQAPTVLNSGVYPDGPPVPVRAGKLLKYVETAEVVRGPHDAPGHWLVTAAKLVTDGGKIGLQVKFALLDYW* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1273 609 SMART MACPF_8 122 319 IPR020864 -
Gso5g1273 609 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 3 608 IPR044663 GO:0006952|GO:0012501|GO:2000031
Gso5g1273 609 PANTHER OS02G0475300 PROTEIN 3 608 - -
Gso5g1273 609 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 331 IPR020864 -
Gso5g1273 609 Pfam MAC/Perforin domain 105 317 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1273 Gso-Chr5 36270779 36276580 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1273 - - gmx:100787945 1216.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1273 5 36270779 36276580 Gso8g0883 8 8217403 8222865 GST
Gso18g0037 18 347074 352369 Gso5g1273 5 36270779 36276580 PCT
Gso13g1585 13 31132708 31137839 Gso5g1273 5 36270779 36276580 PCT
Gso5g1273 5 36270779 36276580 Gso18g0037 18 347074 352369 PCT
Gso5g1273 5 36270779 36276580 Gso13g1585 13 31132708 31137839 PCT