Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1585 ATGAATATGATGGAGGGTGCTGTGTTGCCGAATCCCATAGAGTGTCTGGGTAAAGGGTTTGATCTGACAAGTGATTTTCGATTGAAGTTTGCAAAGGGATCTGGGAGAAGATTGGTGGTGGTTGATGAAGGGAACAAAAGGGACATTACGGTTCCTGGTACTGGAGGAGGAGGAGGAGCTACCATTCCAAATGTTTCTGAGGATATTCGCTGTGACAAGGGCGATCGCCTACGCTTCAAGTCTGATGTCCTTCAATTCAACCAGATGTCTGAGTTGCTTAATCAAAAATCAGCTATACAAGGAAAAATTCCTTCCGGCTATTTCAATGCTCTTTTTGGTTTGAGTGGTGATTGGTTTCGTGATGCTCATGACATAAAATATCTTGCTTTTGATGGTTATTTCATTTCCCTGTACTATTTGCACCTTACTGCTTCACACCTCATACTGCAAGAGGAAGTAAAGAAGTCTGTTCCAGCTCAATGGGACCCAGCTTCATTAACCAGGTTCATTCAGACATATGGTACACACATAATAATAGGTATGGCTGTTGGAGGTCAAGATGTAATTTGTGTCAAACAAAATCATTCTTCCAAGGTTCCACCTGGTGATCTAAGAAGACATTTAGAGAATCTTGGAGATTTTTTGTTTTCAGATTTAAAAAGCCCTTCTCAACAACAAAGGAACAGTACCCCAGAAGGCAAACAAAAAGTTCCTGAGGTCTTTAATCGTGTGATGCAATCAAGTACAACGCAGTTCGCCAGTATTTCAGAAGCATCAAGCAAAGATGGCCTCACTATCATTTGTTCAAAAAGAGGAGGGGATGTGTTCAAGCAAAGTCACTCAAATTGGCTCCAAACAGTGGCTTCTAATCCTGAAGTATTCCTCTTCAAGTTTGTACCTATTTCCTCACTTCTCACAGGAATTCCTGGAAGTGGCTATCTTAGTCATGCAATCAATTTGTATTTACGCTATAAGCCCCCTCCGGATGATTTACAATGCTTCTTGGAGTTTCAAATTCCAAGGCAATGGGCACCCATGTTTTATGACCTTCCTCTGAGGCATCAAAGGAAAAAGTGTTCTTCCCCTTCCCTGCAATTTGGTTTCATGTTTCCCAAGCTTCGTGTCAGCTGTGCACAGGTAGTAAGTGACCAAAAACCTGTGGTAGGCCTACGGATGTACTTGGAAGGCAGAAAAAGTGATAGACTTGCAATACATGTACACCATCTTTCAAGCCTCCCAAACACAATGATCCACTCTTCATCAGGCATATCATTGTGGCGAGGATCTGATGATAATGAATCCAGTGACATCTTTCTAGAACCAATAAGGTGGAAGGGATTTGCAAATGTGTGCACTGCAGTGGTCAAACATGACCCTAACTGGTTGCATGAAACAAGTGGTGTTTATATTGTAAGTGGTGCACAACTCATTAGTAAAGGAAGTTGGCCAAAGAATGTGCTTCACTTGCGCCTCCTATACACTCACATACCCAATTGCTGTATAAGGAAGTCAGAATGGGATGGTGCACCAGAGGCTTCAAGAAAATCATCTTTTCTCACAAATCTAAGCACAACATTTTCATTCACACAACAAAGTCCTCCTCAGAAGCAGGCTCCAACAGTACTTGACTCTGGTGTGTATCCAGATGGTCCACCAGTGCCTGTTCGTTCCTGCAAAATGCTTAAATATGTGGATACAAGTGAGGTTGTGAGGGGCCCGCACGATGCTCCTGGTCATTGGTTGGTAACTGCTGCTAAGCTTGTGACTGAGGGTGGTAAGATTGGATTACAGGTCAAGTTTGCATTGATAGACTACTAG 1818 0.4263 MNMMEGAVLPNPIECLGKGFDLTSDFRLKFAKGSGRRLVVVDEGNKRDITVPGTGGGGGATIPNVSEDIRCDKGDRLRFKSDVLQFNQMSELLNQKSAIQGKIPSGYFNALFGLSGDWFRDAHDIKYLAFDGYFISLYYLHLTASHLILQEEVKKSVPAQWDPASLTRFIQTYGTHIIIGMAVGGQDVICVKQNHSSKVPPGDLRRHLENLGDFLFSDLKSPSQQQRNSTPEGKQKVPEVFNRVMQSSTTQFASISEASSKDGLTIICSKRGGDVFKQSHSNWLQTVASNPEVFLFKFVPISSLLTGIPGSGYLSHAINLYLRYKPPPDDLQCFLEFQIPRQWAPMFYDLPLRHQRKKCSSPSLQFGFMFPKLRVSCAQVVSDQKPVVGLRMYLEGRKSDRLAIHVHHLSSLPNTMIHSSSGISLWRGSDDNESSDIFLEPIRWKGFANVCTAVVKHDPNWLHETSGVYIVSGAQLISKGSWPKNVLHLRLLYTHIPNCCIRKSEWDGAPEASRKSSFLTNLSTTFSFTQQSPPQKQAPTVLDSGVYPDGPPVPVRSCKMLKYVDTSEVVRGPHDAPGHWLVTAAKLVTEGGKIGLQVKFALIDY* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1585 605 PANTHER OS02G0475300 PROTEIN 10 605 - -
Gso13g1585 605 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 10 605 IPR044663 GO:0006952|GO:0012501|GO:2000031
Gso13g1585 605 SMART MACPF_8 125 323 IPR020864 -
Gso13g1585 605 Pfam MAC/Perforin domain 109 321 IPR020864 -
Gso13g1585 605 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 335 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1585 Gso-Chr13 31132708 31137839 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1585 - - gmx:100792859 1202.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0037 18 347074 352369 Gso13g1585 13 31132708 31137839 GST
Gso13g1585 13 31132708 31137839 Gso5g1273 5 36270779 36276580 PCT
Gso13g1585 13 31132708 31137839 Gso8g0883 8 8217403 8222865 PCT
Gso5g1273 5 36270779 36276580 Gso13g1585 13 31132708 31137839 PCT
Gso8g0883 8 8217403 8222865 Gso13g1585 13 31132708 31137839 PCT