Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0037 ATGTTTGTTTATTTTGTGGTTGGTGGTGATATGAATAAGATGGAGGGTACAGTGTTTCCGAATAATCCCATAGAGTGTTTGGGTAAAGGGTTTGATCTGACAAGTGATTTTCGATTGAAGTTTGCAAAGGGATATGGGAAAAGGTTGGTGGTGGTCGATGAAGTGAACAAAAGGGACATCACGGTTCCTGTTCCTGGAGGAGTAGCTACCATTCCAAATGTTTCCGAGGATATACGCTGTGACAAGGGCGATCGCCTACGCTTCAAGTCTGATGTCCTTCAATTCAACCAGATGTCTGAGTTGCTTAATCAAAAATCAGCAATACAAGGAAAAATTCCTTCGGGCTATTTCAACGCTCTTTTTGATTTGGGTGGTGATTGGTTTCGTGATGCTCATGACATAAAATGTCTTGCTTTTGATGGTTATTTCATTTCCCTGTACTATTTGCACCTCACTGCTTCACACCTCATACTGCAAGAGGAAATAAAGAAGTCTGTTCCAGCTCAGTGGGACCCAGCTTCATTAACCAGGTTCATTCAGACATATGGCACACACATAATAATAGGTATGGCTGTTGGAGGTCAAGATGTAATTTGTGTCAAACAAAAACATTCTTCGAAGGTTCCACCTGGTGATCTAAGAAGACATTTAGAGGATCTAGGAGATATTTTGTTTTCAGATTTAAGAAGCCCTTCTCAACAACAAAGGAACACCCCAGAAGGCAAACAAAAAGTTCCTGAGGTCTTTAAGAGTGTGATGCAATCAAGTACAACGCAGTACACCAGTATTTCAGAAACATCAAGCAAAGATGGCCTCACTATCATTTGTTCAAAAAGAGGAGGGGATGTGTTCAAGCAAAGTCACTCCAACTGGCTCCAGACAGTGGCTTCTAATCCTGAAGCAATCCTCTTCAAGTTTGTACCTATTTCCTCACTTCTCACAGGAATTCCTGGAAGTGGCTATCTTAGTCATGCAATCAATTTGTATTTACGCTATAAGCCCCCTCCGGATGATTTACAATGCTTCTTGGAGTTTCAAATTCCAAGGCAATGGGCACCCATGTTTTATGACCTTCCTCTGAGGCATCAAAGGAAAAAGTGTTCTTCCCCTTCCCTGCAATTTGGTTTCATGTTTCCCAAGCTTCATGTCAGCTGTGCACAGGTAGTAAGTGAACAAAAACCTGTGGTAGGCCTACGGTTGTACTTGGAAGGCAGAAAAAGTGATAGACTTGCAATACATGTACACCACCTTTCAAGCCTCCCAAACACTATGATCTACTCTTCAGGCACATCTTCGTGGCGAGGATCTGATGACAATGAATCCAGTGACATCTTTCTGGAACCTATAAGGTGGAAGGGATTTGCAAACGTGTGCACTGCAGTGGTCAAACATGACCCTACCTGGTTGCAAGAAACAAGTGGTGGTGTTTATATTGTAACCGGTGCACAACTCATTAGTAAAGGGACTTGGCCAAAGAATGTGCTTCACTTGCGCCTACTCTATACTCACATACCCAATTGCAGTATCAGGAAGTCAGAATGGGGTGGTGCACCAGAGGCTTCAAGAAAATCATCTTTCCTCACAAATCTGAGCACAACATTTTCATTCACACAGCAAAGTCCTCCTCAGAAGCAGGCTCCGACAGTACTTGACTCTGGTGTGTATCCAGATGGTCCACCAGTGCCAGTTCGATCTGGCAAAATGCTTAAATATGTGGACACAAGCGAGTTTGTGAGGGGCCCGCATGATGCTCCTGGTCATTGGTTGGTAACTGCTGCTAAGCTTGTTACTGAGGGTGGTAAGATTGGATTACAGGTCAAGTTTGCTTTGTTAGACTACTAG 1842 0.4321 MFVYFVVGGDMNKMEGTVFPNNPIECLGKGFDLTSDFRLKFAKGYGKRLVVVDEVNKRDITVPVPGGVATIPNVSEDIRCDKGDRLRFKSDVLQFNQMSELLNQKSAIQGKIPSGYFNALFDLGGDWFRDAHDIKCLAFDGYFISLYYLHLTASHLILQEEIKKSVPAQWDPASLTRFIQTYGTHIIIGMAVGGQDVICVKQKHSSKVPPGDLRRHLEDLGDILFSDLRSPSQQQRNTPEGKQKVPEVFKSVMQSSTTQYTSISETSSKDGLTIICSKRGGDVFKQSHSNWLQTVASNPEAILFKFVPISSLLTGIPGSGYLSHAINLYLRYKPPPDDLQCFLEFQIPRQWAPMFYDLPLRHQRKKCSSPSLQFGFMFPKLHVSCAQVVSEQKPVVGLRLYLEGRKSDRLAIHVHHLSSLPNTMIYSSGTSSWRGSDDNESSDIFLEPIRWKGFANVCTAVVKHDPTWLQETSGGVYIVTGAQLISKGTWPKNVLHLRLLYTHIPNCSIRKSEWGGAPEASRKSSFLTNLSTTFSFTQQSPPQKQAPTVLDSGVYPDGPPVPVRSGKMLKYVDTSEFVRGPHDAPGHWLVTAAKLVTEGGKIGLQVKFALLDY* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0037 613 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 20 613 IPR044663 GO:0006952|GO:0012501|GO:2000031
Gso18g0037 613 PANTHER OS02G0475300 PROTEIN 20 613 - -
Gso18g0037 613 Pfam MAC/Perforin domain 125 329 IPR020864 -
Gso18g0037 613 MobiDBLite consensus disorder prediction 537 556 - -
Gso18g0037 613 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 10 343 IPR020864 -
Gso18g0037 613 SMART MACPF_8 134 331 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0037 Gso-Chr18 347074 352369 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0037 - - gmx:100818022 1238.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0037 18 347074 352369 Gso13g1585 13 31132708 31137839 GST
Gso18g0037 18 347074 352369 Gso5g1273 5 36270779 36276580 PCT
Gso18g0037 18 347074 352369 Gso8g0883 8 8217403 8222865 PCT
Gso5g1273 5 36270779 36276580 Gso18g0037 18 347074 352369 PCT
Gso8g0883 8 8217403 8222865 Gso18g0037 18 347074 352369 PCT