Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0152 ATGCGACGACGGGCTGCCGAGTATCGGCGCCCGGCACGACGGAGGTTTTCATATTGGATCTGGCTTCTCCTTGCTTTCTCCTCCATCCTCGCTTTGCTCCTTTTCCTTCTCCAACACAATCACCACCACCAAGATCCGCTTCATCATCCTTTGTCAGAGAGAAATGCAAGAGTTGAACATTTTGCTAAGGAGGGTTTCAATTTTACTGAAGAGATTTTAAGTGTAACATCATTTTCGCGACAGTTAGCAGAACAAATGATTCTGGCCAAGGTTTATGTGGTTATTGCCAAAGAACACAACAATCTTCACCTTGCCTGGCAGCTTAGCTCAAAGATCAGAAGTTGTCAGCTTTTGCTTTCAAAAGCTGCCATGACTGGTGAGCCTGTCACATTGGAGGAAGCAGAGCCAATTATTAAAAGCCTTTCTTTTCTAATGTTTAAGGCACAAGATATCCATTATGACATTGCAACCACAATAGTGACTATGAAATCGCACATTCAAGCTCTTGAAGAGCGTGCCAATGCAGCAATAGTTCAAAGCACTGTGTTTGGTCAAATAGCAGCGGAAGCAGTACCTAAGAGTCTTCATTGTCTAAATGTGAAACTCATGTCTGATTGGCTAAAGATGCCATCCCTGCAAGAATTCTCAGATGAGAGGAAAAACTCCCCACGGCTTGTGGACAACAATCTATATCATTTCTGCATATTTTCAGATAATGTTCTGGCAACATCTGTAGTTGTAAACTCAACTGTCTCCAATGCGGATCATCCTAAGCAATTAGTCTTTCACATTGTCACTAATGGAATCAATTATGGAGCAATGCAAGCATGGTTCCTAAATAATGACTTTAAAGGAGCCACCATAGAGGTACAAAACATTGAGGAGTTTCATTGGTTGAACGCATCTTATTCTCCTCTTTACAAGCAGCTCCTCAATCCTGATTCACAAACCTTCTACTTTGGAGCATATCAAGATTTAAATGATGAACCCAAAATGCGGAATCCCAAGTATTTGTCTTTACTGAATCATCTCCGGTTTTACATCCCTGAGATTTATCCGCAACTTGAGAAGGTTGTCTTCCTGGATGATGACCTTGTTGTCCAGAAGGATCTGACCCCTCTTTTCTCTCTGGATTTGCATGGGAATGTGAATGGTGCAGTTGAAACTTGTCTGGAAGCATTTCATCGTTACTACAAGTATCTCAACTTCTCAAACTCAATTATTAGCTCGAGGTTTGATCCGCAGGCATGTGCTTGGGCATTTGGTATGAACATTTTTGACTTGGTTGCATGGCGGAAGGCAAACGTGACCACAAGATATCACTATTGGCAAGAGCAGAATGCTGATGGGACTCTCTGGAAGCTGGGGACACTTCCTCCTGCTCTTCTTTGTTTTTATGGTTTGACAGAGCCACTTGACAGAAGATGGCATGTTTTAGGATTGGGTTATGACCTAAATATTGACAACCGCCTCATTGAAAGTGCAGCAGTTATTCACTTCAATGGGAACATGAAGCCATGGTTGAAGTTAGCTATAGGAAGGTATAAGCCACTATGGGACAAGTACGTAAATCAAAGTCACCCTCATCTTCAAGGTTGTGTCACAAGTTGA 1611 0.4227 MRRRAAEYRRPARRRFSYWIWLLLAFSSILALLLFLLQHNHHHQDPLHHPLSERNARVEHFAKEGFNFTEEILSVTSFSRQLAEQMILAKVYVVIAKEHNNLHLAWQLSSKIRSCQLLLSKAAMTGEPVTLEEAEPIIKSLSFLMFKAQDIHYDIATTIVTMKSHIQALEERANAAIVQSTVFGQIAAEAVPKSLHCLNVKLMSDWLKMPSLQEFSDERKNSPRLVDNNLYHFCIFSDNVLATSVVVNSTVSNADHPKQLVFHIVTNGINYGAMQAWFLNNDFKGATIEVQNIEEFHWLNASYSPLYKQLLNPDSQTFYFGAYQDLNDEPKMRNPKYLSLLNHLRFYIPEIYPQLEKVVFLDDDLVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNSIISSRFDPQACAWAFGMNIFDLVAWRKANVTTRYHYWQEQNADGTLWKLGTLPPALLCFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVIHFNGNMKPWLKLAIGRYKPLWDKYVNQSHPHLQGCVTS* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0152 536 Pfam Glycosyl transferase family 8 235 510 IPR002495 GO:0016757
Gso5g0152 536 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 233 531 IPR029044 -
Gso5g0152 536 CDD GT8_like_1 231 524 - -
Gso5g0152 536 PANTHER HEXOSYLTRANSFERASE 3 536 - -
Gso5g0152 536 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 536 IPR029993 GO:0047262
Gso5g0152 536 SUPERFAMILY Nucleotide-diphospho-sugar transferases 231 534 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0152 Gso-Chr5 1626177 1629500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0152 1 533 Glycosyltransferase AT2G20810 56.134 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0152 K13648 - gmx:100798878 1030.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0152 5 1626177 1629500 Gso17g0688 17 6344229 6347833 GST
Gso5g0152 5 1626177 1629500 Gso4g1337 4 38513616 38517946 PCT
Gso4g1337 4 38513616 38517946 Gso5g0152 5 1626177 1629500 PCT