Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0688 ATGCGACGACGGGCTGCCGAGTATCGGCGCCCGGCACGACGGAGGTTTTCATATTGGATCTGGCTTCTCCTTGCTTTCTCCTCCATCCTCGGATTGCTCCTCTTCCTTCTGCAGCACAATCACCACCACCAAGATCCGCTTCATCATCCTTTGCCCGAGAGAAATGCAAGAGTTGAACATTTTGCTAAGGAGGGCTTGAATTTTACTGAAGAGATTTTAAGTGTAGCATCATTTTCGCGGCAGTTAGCGGAACAAATGATCCTGGCCAAGGCTTATGTGGTTATTGCCAAAGAACACAACAATCTTCACCTTGCCTGGCAGCTTAGCTCAAAGATCAGAAGTTGCCAGCGTTTGCTTTCGAAAGCTGCCATGACTGGTGAGCCCATCACACTGGAGGAAGCAGAGCCAATTATTAAAAGCCTTTCTTTTCTAATGTTTAAGGCACAAGATATCCATTATGACATTGCAACCACAATAGTGACTATGAAATCACATATTCAAGCTCTCGAAGAGCGGGCCAATGCAGCAATAGTTCAAAGCACTGTGTTTGGTCAAATAGCAGCCGAAGCAGTACCTAAGAGTCTTCATTGTCTAAATGTGAAACTCATGTCTGATTGGCTAAAGATGCCATCCCTGCAAGAATTCTCAGACGAGAGGAAAAACTCCCCACGGCTTGTGGACAACAATCTATATCATTTCTGCATATTTTCAGATAATATACTGGCAACATCTGTAGTTGTAAACTCAACTGTCTCTAATGCAGATCATCCAAAGCAATTAGTCTTTCACATTGTCACTAATGGAGTCAATTATGGGGCAATGCAAGCATGGTTCCTAAATAATGACTTTAAAGGAGCCACCATAGAGGTACAAAACATTGAGGAGTTTCATTGGTTGAATGCATCTTATTCTCCTCTTGTCAAGCAGCTCCTCAATCCTGATTCACAAACCATCTATTTTGGAGCATATCAAGATTTAAATGTTGAACCCAAAATGCGTAATCCCAAGTATTTGTCTTTACTGAATCATCTCCGGTTTTACATCCCTGAGATTTATCCGCAACTTGAGAAGGTTGTCTTCCTGGATGATGACCTTGTTGTCCAGAAGGATCTTACCTCTCTTTTCTCTCTGGATTTGCATGGGAATGTGAATGGTGCAGTTGAAACTTGTCTTGAAGCATTTCATCGTTACTACAAGTATCTCAACTTCTCAAACTCAATTATTAGCTCGAGGTTTGATCCACAGGCATGTGCATGGGCATTTGGTATGAACATTTTTGACTTGGTTGCATGGCGGAAGGCAAACGTGACCGCAAGATATCACTATTGGCAAGAGCAGAATGCTGATGGGACTCTTTGGAAGCTGGGGACACTTCCTCCTGCTCTTCTTTGTTTTTATGGTTTGACAGAGCCACTTGACAGAAGATGGCATGTTTTAGGATTGGGTTATGACCTAAATATTGACAACCGCCTCATTGAAAGTGCAGCAGTTATTCACTTCAATGGGAACATGAAGCCATGGTTGAAGTTAGCTATAGGCAGGTATAAGCCACTATGGGACAAGTACATAAATCAAAGTCACCCTCATCTACAAGATTGTGCCACAAGTTGA 1611 0.4277 MRRRAAEYRRPARRRFSYWIWLLLAFSSILGLLLFLLQHNHHHQDPLHHPLPERNARVEHFAKEGLNFTEEILSVASFSRQLAEQMILAKAYVVIAKEHNNLHLAWQLSSKIRSCQRLLSKAAMTGEPITLEEAEPIIKSLSFLMFKAQDIHYDIATTIVTMKSHIQALEERANAAIVQSTVFGQIAAEAVPKSLHCLNVKLMSDWLKMPSLQEFSDERKNSPRLVDNNLYHFCIFSDNILATSVVVNSTVSNADHPKQLVFHIVTNGVNYGAMQAWFLNNDFKGATIEVQNIEEFHWLNASYSPLVKQLLNPDSQTIYFGAYQDLNVEPKMRNPKYLSLLNHLRFYIPEIYPQLEKVVFLDDDLVVQKDLTSLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNSIISSRFDPQACAWAFGMNIFDLVAWRKANVTARYHYWQEQNADGTLWKLGTLPPALLCFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVIHFNGNMKPWLKLAIGRYKPLWDKYINQSHPHLQDCATS* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0688 536 CDD GT8_like_1 231 524 - -
Gso17g0688 536 SUPERFAMILY Nucleotide-diphospho-sugar transferases 231 533 IPR029044 -
Gso17g0688 536 Pfam Glycosyl transferase family 8 236 510 IPR002495 GO:0016757
Gso17g0688 536 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 233 533 IPR029044 -
Gso17g0688 536 PANTHER HEXOSYLTRANSFERASE 3 536 - -
Gso17g0688 536 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 536 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0688 Gso-Chr17 6344229 6347833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0688 1 533 Glycosyltransferase AT2G20810 56.134 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0688 K13648 - gmx:100805886 1043.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0152 5 1626177 1629500 Gso17g0688 17 6344229 6347833 GST
Gso17g0688 17 6344229 6347833 Gso4g1337 4 38513616 38517946 PCT
Gso4g1337 4 38513616 38517946 Gso17g0688 17 6344229 6347833 PCT