Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0632 ATGAGTAGACCAACAACACGGAGTAAAAATAAAAGACAGAAACAAGGGGATGATGGCAATGGCACTAGTGAAATATGGAGGAAAATTCATAATACAGGGGTGGTATCCAAGGATGACATGAATCAATTGTATATGATTTGGAAGCCAGTTTGTTCAGGCTGCCGTGTCAATACCAAAGATAACCCAAATTGCTTCTGTGCATTGGTTCCACCTCCAAATGGAGCCCGGAAGTCTGGCTTATGGCAAAAGATGTCAGATGTTGTTGAGAGTCTTGGCCATGACCCAACCAAGGATCTTCGAGCTTCTGCTGATTCTCCTGCAGGTCTCACAAATCTGGGAGCAACATGCTATGCCAACTGTATACTCCAGTGCTTGTACATGAATAAATCTTTCCGAGAAGGCATGTTTTCTGTAGAACGAGATGTTTTACAACAACACCCTGTGCTGGATCAGCTGGCTCGACTTTTTGTGCAGTTGCATATTAGTAAAATGGCTTTCATAGATTCTTCTCCATTTGTAAAAACACTGGAATTAGATAATGGAGTTCAGCAGGATAGCCATGAGTTCCTGACATTGCTTCTCTCTTTGCTTGAGCGTTGTCTGAGCCATTCCAAAGTGCCCAAGGCAACAACAATAGTTCAAGATCTTTTCCGAGGAAGTGTTTCTCATGTGACGACGTGCTCACAATGTGGAAGAGACTCTGAAGCTTCTTCCAAAATGGAAGATTTCTATGAATTGGAGTTGAATGTCAAAGGATTGAAAAGTTTAGATGAGAGCCTAGATGAATATCTCACTGCTGAAGAGCTTAATGGGGACAATCAATATTTTTGTGAGTCGTGTAAAACAAGAGTTGATGCTACTCGCAGCATCAAGCTGTGTACATTACCCAAAGTACTTAATTTTCAGCTTAAACGTTATGTCTTCCTTCCTAAGACTACAACAAAGAAGAAAGTTACTTCTGCATTTTCATTTCCTGCTGAACTTGATATGCGGCATAGAATGTCTGAGTTGTCTCAGTTCAACTTGGTATATGACTTGTCAGCTGTACTGATTCACAAGGGAACTGGTGCTAATAGTGGCCATTACATTGCTCACATCAAGGATGTAAACACTGGGCAATGGTGGGAATTTGATGATGAGCATGTTACTAATTTGGGTTTTCATCCATTTGGTGAAGAGTCTTCAAGTTCTACTACTAAATCCATCAAGACTGATGCAATTCATTCTGATAATTCTGAAGCAATGGTAGCTGACAGTAATGGAAATGGTTTAAATGCTACTCATTCACTATCTTCACAAGTGGAGACATTTTTGTCTAGTGATGCGTACATGTTGATGTACCATCTTAAACAAACAAAAAATGTTGGTGAAAGTGGGGGTGTAATTTGTGGTGCTAACCATAAAGAAAGCGAGGGTGTTGTAGTTGCTGTGCAAAATGGTGTTCCTCTTCCATCTCATATTTATGATGAGATTCAAAGTTTCAATGCCTCATATGATGATGCTTGTCAGCGGTACAATAATAGGAAAGAGTTAGAATTGAGTCTTATTAGTGAGAGAAGACAGGAAGTTCGATCTGTTTTAGCTGAAGCTCCTGTTCAACCATTGGAGCAGCCATTTTATTGGATTTCTAGTGAATGGCTTCGTCAATGGGCAGACAACATTATTCCAATTCCTCTTGACAACACGCCGGTCCAATGCTCACATGGGAAAGTCCCAGTTTCAAAGGTTACCTCAATGAAGCGGTTGTCTGCTAAAGCATGGGATACATTGTTCTCCAAGTATGGTGGAGGACCAGCATTGTCTCATGATAACCACTGTCGGGATTGCCTGATTCATGGGGCTATGACAGTGGTGTCAGCTGACACCTATCGGGATAGAAGAGAATCAATGAAGTCACTTGCACGGGATATTCTAGATGGAAACTGCCTAGATGGAAAGTATTACATATCCAGACCATGGTTGCAGCAGTGGTGGAAAAGAAAAGTCCTTGATGCTCCATCTGAAGCTGATGCTGGACCAACAGCAGCCATTAGTTGTCCACATGGTCAATTGATGCCAGAGCAAGCTCCTGGTGCTAAGCGGGTGCTTATTCCTGAGATCTTTTGGCTCTTCTTATATGAAGATGCTGTTTCTGTAAAGCCTGATGATCCTTTGGGTGGCCCAACTTTTTCTTCAGATTCTGATGAGTGTTCCCAATGCAGTAATGAATTATCTGAAGTAGCATGCTTGGAGGACTCCTTGAGATTAGTTAAACAAAAACAACGTCAGAATCATGAGAAATTATTCCAGGCTAAAAGTTTGCAACTTTCTCTGCACAGCAAGTATTTCTTGGTGCCTTTGTCATGGATTTCAAAATGGAGAAATTACATTAGTCCAACCCTGAAGAATTCAGATAAACCTGAAACCTTAGATGGGGTAATTGACTCACTGTTGTGTGAAAAGCACTCACGGCTAATTGAAAGACCTCCTGAATTGGTTTTCAGACGTGGTGCTATAATCCAGAGGGAATCTTCTGCAGGTGGCTTAACCATTGTATCTGAGAATGATTGGAAATGCTTCTGTGAAGAATGGGGCGGTATTGAGACCAAAGGAATATCAGCAACAATTGATCATGTTAATGATTCAGAGAATGTATTGACTGGATCCAGTGAAGAGATGCAAGTATGCAAGGATCAGTTGAGCACAGCAGATAAAATGAATTTTGAAAATGGGACTGGACAAAATTTAATTAAGACTTGTCCTGAGGTTTGTGAAAGTTGCATCGGAGAAAGGGAGAGCTGTGAGCTAATGCAGAAGCTTAACTATTGCAATGAGGACATATGTGTAATTCTTGTTCGTGGTAAGGAGGTACCCAGATCAATATTGGAGGCTTCAAAGGGATTCGTTGAAACAGATCGGCGAGTTTCAAAACGTTCCCGCAAGTCTAAAAATGGGAATTCAATTAGTCTAAAAGTTTCTGCTTCAACATCTTTATATCAGCTGAAAATGATGATATGGGAATCCTTTGGGGTTGTCAAGGAAAACCAGATACTACATAAAGGTGATAGGATAATTGTTGGGGATGATGAATGTGCTACCCTCGCAGATGTGAACATATTTGCTGGAGATCAGATTATAGTGAGGGACTCTGAGATCCATGAAAATCGAGATATTGCTGATGAGCTTTGTGATGATAAAATGGATCTGCAGCATACCGAGGAAGGGTTCCGGGGAACACTTCTCACAGCAAATGTTTCATCCCAGGAGCCTCCACCGAACCATGAATCCCAGCCAGAATCTACTGGATCTTAA 3291 0.412 MSRPTTRSKNKRQKQGDDGNGTSEIWRKIHNTGVVSKDDMNQLYMIWKPVCSGCRVNTKDNPNCFCALVPPPNGARKSGLWQKMSDVVESLGHDPTKDLRASADSPAGLTNLGATCYANCILQCLYMNKSFREGMFSVERDVLQQHPVLDQLARLFVQLHISKMAFIDSSPFVKTLELDNGVQQDSHEFLTLLLSLLERCLSHSKVPKATTIVQDLFRGSVSHVTTCSQCGRDSEASSKMEDFYELELNVKGLKSLDESLDEYLTAEELNGDNQYFCESCKTRVDATRSIKLCTLPKVLNFQLKRYVFLPKTTTKKKVTSAFSFPAELDMRHRMSELSQFNLVYDLSAVLIHKGTGANSGHYIAHIKDVNTGQWWEFDDEHVTNLGFHPFGEESSSSTTKSIKTDAIHSDNSEAMVADSNGNGLNATHSLSSQVETFLSSDAYMLMYHLKQTKNVGESGGVICGANHKESEGVVVAVQNGVPLPSHIYDEIQSFNASYDDACQRYNNRKELELSLISERRQEVRSVLAEAPVQPLEQPFYWISSEWLRQWADNIIPIPLDNTPVQCSHGKVPVSKVTSMKRLSAKAWDTLFSKYGGGPALSHDNHCRDCLIHGAMTVVSADTYRDRRESMKSLARDILDGNCLDGKYYISRPWLQQWWKRKVLDAPSEADAGPTAAISCPHGQLMPEQAPGAKRVLIPEIFWLFLYEDAVSVKPDDPLGGPTFSSDSDECSQCSNELSEVACLEDSLRLVKQKQRQNHEKLFQAKSLQLSLHSKYFLVPLSWISKWRNYISPTLKNSDKPETLDGVIDSLLCEKHSRLIERPPELVFRRGAIIQRESSAGGLTIVSENDWKCFCEEWGGIETKGISATIDHVNDSENVLTGSSEEMQVCKDQLSTADKMNFENGTGQNLIKTCPEVCESCIGERESCELMQKLNYCNEDICVILVRGKEVPRSILEASKGFVETDRRVSKRSRKSKNGNSISLKVSASTSLYQLKMMIWESFGVVKENQILHKGDRIIVGDDECATLADVNIFAGDQIIVRDSEIHENRDIADELCDDKMDLQHTEEGFRGTLLTANVSSQEPPPNHESQPESTGS* 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0632 1096 SMART dusp 532 603 IPR006615 GO:0004843
Gso4g0632 1096 Gene3D - 506 607 IPR035927 -
Gso4g0632 1096 MobiDBLite consensus disorder prediction 1 25 - -
Gso4g0632 1096 ProSiteProfiles DUSP domain profile. 749 869 IPR006615 GO:0004843
Gso4g0632 1096 SUPERFAMILY DUSP-like 518 606 IPR035927 -
Gso4g0632 1096 SUPERFAMILY Cysteine proteinases 106 450 IPR038765 -
Gso4g0632 1096 SUPERFAMILY Ubiquitin-like 975 1044 IPR029071 -
Gso4g0632 1096 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 344 362 IPR018200 GO:0004843|GO:0006511
Gso4g0632 1096 Gene3D - 745 865 IPR035927 -
Gso4g0632 1096 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 2 1053 - -
Gso4g0632 1096 MobiDBLite consensus disorder prediction 1075 1096 - -
Gso4g0632 1096 CDD Ubl_USP48 973 1074 IPR044743 GO:0004197|GO:0004843|GO:0016579
Gso4g0632 1096 Pfam Ubiquitin carboxyl-terminal hydrolase 108 447 IPR001394 GO:0004843|GO:0016579
Gso4g0632 1096 CDD Peptidase_C19L 108 447 IPR033841 GO:0004843
Gso4g0632 1096 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 2 1053 - -
Gso4g0632 1096 Gene3D Cysteine proteinases 89 450 - -
Gso4g0632 1096 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 107 450 IPR028889 -
Gso4g0632 1096 ProSiteProfiles DUSP domain profile. 621 728 IPR006615 GO:0004843
Gso4g0632 1096 MobiDBLite consensus disorder prediction 10 24 - -
Gso4g0632 1096 ProSiteProfiles DUSP domain profile. 514 606 IPR006615 GO:0004843
Gso4g0632 1096 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 108 123 IPR018200 GO:0004843|GO:0006511
Gso4g0632 1096 Gene3D - 972 1043 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0632 Gso-Chr4 6149409 6161327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0632 105 439 Miscellaneous Gene Families AT2G24640 27.882 4.89e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0632 - K11858 gmx:100782778 2202.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0632 4 6149409 6161327 Gso6g0635 6 5885294 5897390 GST
Gso14g1076 14 18746618 18756634 Gso4g0632 4 6149409 6161327 PCT
Gso4g0632 4 6149409 6161327 Gso14g1076 14 18746618 18756634 PCT