Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1076 ATGACTAGACCAACAACTCGAAGTAAAAATAAAAGGCAGAGACAGGGGGATGATGATGGTGGTGGCACTTCTGACATATGGAGGAAAATTCACATAACGGGTGCGGTGACTGAAGATGATATGAATCAACTGTATATGATTTGGAAGCCAGTCTGTTCAGGCTGTCGTGTTAATACTAAAGACAACCCGAATTGCTTCTGTGCATTGGTTCCACCTGCGAATGGTACCCGAAAGTCTGGTTTATGGCAGAAGATGGCCGACTTTGTCGAAAGTCTTGGTCCCGACCCAAATATGGATCTTCGTGTTTCTGATAGTTCACCTGCAGGTCTGACAAATCTTGGCGCAACATGCTATGCCAACAGTATACTACAGTGCTTGTATATGAATAAATCTTTCCGAGAAGGCATATTTTCTGTAGAACCGGATGTTTTACAACAACAACCAGTGTTAGATCAACTGACTCAACTTTTTGTACATTTGCATGCTAGTAAAATGGCTTTCATAGATTCTTCTCCATTTGTAAAAACATTGGAGCTAGACAATGGAATTCAGCAGGATAGCCACGAGTTCTTGACATTGCTTCTGTCATTACTTGAGCGTTGTTTGAGCCATTCCAAAATTGCCAAGGCAAGAACAATAGTTCAAGATCTTTTTCGAGGAAGTGTGTCTCATGTGACAACGTGTTCGCAATGTGGAAGAGACTCTGAGGCTTCTTCCAAAATGGAAGACTTCTATGGGTTAGAGTTGAATATCAAGGGACTGAAAGGTTTAGATGAGAGCCTAGATGATTATCTTGCTATTGAAGAGCTTCATGGAGACAATCAATATTTCTGTGAGTCATGTAAAACAAGAGTTGATGCTACTCGCAGCATCAAGCTGTGTACATTGCCTGATGTACTTAATTTTCAACTTAAACGTTATGTCTTCCTTCCACAGAATACAATGAAGAAGAAAGTTACTTCTGCATTTTCATTTCCTGCTGAACTTGATATGCGCCATAGATTGTCTGAGCCATCTCAGTTTGAATTGATATATGACTTGTCAGCTGTACTGATTCACAAAGGAACTGCTGTTAATAGTGGTCATTACATTGCCCATATCAAGGATGTAAACACTGGGCAATGGTGGGAGTTTGATGACGAGAATGTTACTAACTTGGGTTGCCATCCATTTGGGGAAGGAACTTCTTCTACTTCTAAATCTGTTAAGACAGATGTACTTCATTCTAATTGCTCTGAAGCAATGCTAGCTGACAGTAATGGTTTAGATGCCACTCATGCGCAATCTTTGCTTGTGGAGACATTTTCATCTAGTGATGCTTACATGTTGATGTACCATCTTAAGCATAGCAAAAATGTTGGTGAAAAGGGGGGAATCGTTTATGGTGCTAACCTTGAAGTAGAGGGCAATGCAGTTACTGCACAAGACAGTGCTTGTCTTCCTTCTCATTTTTGCAAAGAGATTCAAAATTTCAATGCTTCATATCTTGATTCTTGCGAGCAGTACAAACATAGGAAAGAGTTAGAATTGAGCCATATCAATGAGAGGAGACAGGAAGTTCGATCCATTTTAGCTGAAGCTCCTACTCAACCACTGGAGCAACCGTATTTTTGGATTTGTAGTGACTGGCTTCGCCAGTGGGCTGACAACATTATTCCAATTGCTCTTGACAATACATCTATCCAATGTTCACATGGGAAAGTCCCAGTGTCAAAGGTTACCTCAATGAAGCGATTATCTTCTAAAGCATGGGATAAATTATTGTCTAAGTATGGTGGGGGACCAACTCTTTCTCATGAAGACTGTTGTTGGGATTGTCTGATTGATGGGGCTCAGAATGTGGTGTCAGCTGACACTTATCGGGATCAAAGAGAATCATTGAAGCGACTTGCACGGGATATTCTCGATGGAAATTGTGAAGACGGAATGTACTATGTGTCTAGACCATGGTTGCAGCAATGGTGGAAAAGAAAAGTTGTTGATGCTCCATCTGAAGCTGATGCTGGACCAACAGCAGCCATTTGTTGTCCACATGGGCAACTTATGCCTGAGCAAGCTGTTGGTGCTAAGCGGTTGCTTGTTCCTGAGGATTTCTGGCTTTTCTTATATAAAGATGCCATTTCTGTAAAACCTGATGATCCTCTAGGTTGCCCTACTTTTCCTTTAGACTCCAGAAGGTGTTCCCAATGCAGTGATGAATTATCTGAAGAGGCTTGCTTGGAGGACTCTTTGAGATTAGTAAAACAAATGCAACGCCAAAATCATGAGAAATTATTTGTTGGTAAAAGTATGCCGCTTTCTCTACATTGCAAGTATTTCTTAGTTCCTTCTTCGTGGATTTCAAAATGGAGAAATTACATTAATTTGGCTGTCAAGAATTCAGATAAACCTGAAACTTTAGATGGGGTAATCGATTCACTGATGTGTGAAAAGGTAAGTGGCTTAACCATCATATCTGAGAATGATTGGAAATGCTTCTGTGAAGAATGGAGTGGTATTGAGACCAAAGGAATATCTGCAAGAATTGAGAATGTTAATGATTCAGAAAATGCTTTGACTGGATCCTGCAGAGAGATGCCAATATGTGAGGATCAACTTAACACTTGGGATAAAGTGAATAATGAAAGTGGGAATGGACACATTGTGATTAAGACTTGTCCTGAGGTTTGTGAAAGTTGCGTTGGAGAAAAGGAAAGCTGTGAGTTAATGCAGAAACTTAACTATTGCAATCAGGACATTAGTGTAATTCTTGTCCGTGGAAAGGAGGTCCCTAAATCAATCTTAGAGGCTTCAAAGGGCTTTGTTGAAATAGACAGGCGGGTTTCCAAACGTTCCCGGAAGACTAAAAATGGGAGTTCCATTAGTCTAAAAGTTTCTGCTTCAACATCTATTTACCAGCTGAAAATGATGATATGGGAATCCTTTGCGGTTGTCAAAGAAAACCAGATACTACAAAAAGGTGATAGAACAATTGATGTTGATAATGAATATGCTACGCTTGTGGATGCAAACATATTTGCTGGAGATCAGATTATTGTGAGGGACTCCGAGATCCATGAAAATCGAGATATTGCAGATGAGCTTTGTGATGAGGAAATGGAAACACAACATACCGAGGCAGGATTTCGTGGAACACTCTTAACATCGAACGTTTCATCTCAGGTGGTTTAG 3171 0.4037 MTRPTTRSKNKRQRQGDDDGGGTSDIWRKIHITGAVTEDDMNQLYMIWKPVCSGCRVNTKDNPNCFCALVPPANGTRKSGLWQKMADFVESLGPDPNMDLRVSDSSPAGLTNLGATCYANSILQCLYMNKSFREGIFSVEPDVLQQQPVLDQLTQLFVHLHASKMAFIDSSPFVKTLELDNGIQQDSHEFLTLLLSLLERCLSHSKIAKARTIVQDLFRGSVSHVTTCSQCGRDSEASSKMEDFYGLELNIKGLKGLDESLDDYLAIEELHGDNQYFCESCKTRVDATRSIKLCTLPDVLNFQLKRYVFLPQNTMKKKVTSAFSFPAELDMRHRLSEPSQFELIYDLSAVLIHKGTAVNSGHYIAHIKDVNTGQWWEFDDENVTNLGCHPFGEGTSSTSKSVKTDVLHSNCSEAMLADSNGLDATHAQSLLVETFSSSDAYMLMYHLKHSKNVGEKGGIVYGANLEVEGNAVTAQDSACLPSHFCKEIQNFNASYLDSCEQYKHRKELELSHINERRQEVRSILAEAPTQPLEQPYFWICSDWLRQWADNIIPIALDNTSIQCSHGKVPVSKVTSMKRLSSKAWDKLLSKYGGGPTLSHEDCCWDCLIDGAQNVVSADTYRDQRESLKRLARDILDGNCEDGMYYVSRPWLQQWWKRKVVDAPSEADAGPTAAICCPHGQLMPEQAVGAKRLLVPEDFWLFLYKDAISVKPDDPLGCPTFPLDSRRCSQCSDELSEEACLEDSLRLVKQMQRQNHEKLFVGKSMPLSLHCKYFLVPSSWISKWRNYINLAVKNSDKPETLDGVIDSLMCEKVSGLTIISENDWKCFCEEWSGIETKGISARIENVNDSENALTGSCREMPICEDQLNTWDKVNNESGNGHIVIKTCPEVCESCVGEKESCELMQKLNYCNQDISVILVRGKEVPKSILEASKGFVEIDRRVSKRSRKTKNGSSISLKVSASTSIYQLKMMIWESFAVVKENQILQKGDRTIDVDNEYATLVDANIFAGDQIIVRDSEIHENRDIADELCDEEMETQHTEAGFRGTLLTSNVSSQVV* 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1076 1056 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 109 124 IPR018200 GO:0004843|GO:0006511
Gso14g1076 1056 ProSiteProfiles DUSP domain profile. 511 603 IPR006615 GO:0004843
Gso14g1076 1056 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 2 818 - -
Gso14g1076 1056 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 823 1025 - -
Gso14g1076 1056 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 108 448 IPR028889 -
Gso14g1076 1056 CDD Peptidase_C19L 109 445 IPR033841 GO:0004843
Gso14g1076 1056 ProSiteProfiles DUSP domain profile. 618 720 IPR006615 GO:0004843
Gso14g1076 1056 CDD Ubl_USP48 946 1049 IPR044743 GO:0004197|GO:0004843|GO:0016579
Gso14g1076 1056 ProSiteProfiles DUSP domain profile. 746 842 IPR006615 GO:0004843
Gso14g1076 1056 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 2 818 - -
Gso14g1076 1056 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 823 1025 - -
Gso14g1076 1056 SUPERFAMILY Cysteine proteinases 107 448 IPR038765 -
Gso14g1076 1056 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 345 363 IPR018200 GO:0004843|GO:0006511
Gso14g1076 1056 Gene3D Cysteine proteinases 97 448 - -
Gso14g1076 1056 SMART dusp 529 605 IPR006615 GO:0004843
Gso14g1076 1056 MobiDBLite consensus disorder prediction 1 24 - -
Gso14g1076 1056 SUPERFAMILY Ubiquitin-like 949 1015 IPR029071 -
Gso14g1076 1056 Pfam Ubiquitin carboxyl-terminal hydrolase 109 445 IPR001394 GO:0004843|GO:0016579
Gso14g1076 1056 Gene3D - 945 1016 - -
Gso14g1076 1056 MobiDBLite consensus disorder prediction 10 24 - -
Gso14g1076 1056 SUPERFAMILY DUSP-like 515 602 IPR035927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1076 Gso-Chr14 18746618 18756634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1076 106 386 Miscellaneous Gene Families AT4G31670 29.766 6.53e-28 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1076 - - gmx:100795556 2111.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1076 14 18746618 18756634 Gso4g0632 4 6149409 6161327 PCT
Gso14g1076 14 18746618 18756634 Gso6g0635 6 5885294 5897390 PCT
Gso4g0632 4 6149409 6161327 Gso14g1076 14 18746618 18756634 PCT
Gso6g0635 6 5885294 5897390 Gso14g1076 14 18746618 18756634 PCT