Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g2194 ATGGCAAAGCCAAGATCTTGGACTCAGATATGGCCTTCTATTGTTGGAGTGTGTCTTCTGAATTTTGTTCTGAACTTCAAGATCGTGGCAGTAGCAGATGACACTGGAAGCAACAGTATTGTATCAGAAGGTGACTGCAAGAACACAAATTATCAGATTTTTCTCCCTCCACCTTATCAGAATATATCCTCTACCATATGCAAACCTGTTTGGCATTCATACGAATTGAGGTACACCAAGACGGGTGACACCACAACTATCATATTATCTGCTCCCTACACTGTTGGATGGGTGGGAATTGGATTTTCTAGGGATGGTATGATGGCTGGTTCCAGTGCAATGGTGGGATGGATTAACAAACATGGCCATGCAAAAGTCAAGCAGTTTTATTTAAGGGGTAGGAGGCAATCAGAAGTAATTATAGACAAAGGTGAACTGCCTCTAAATACTGTGCCTGCGGCAGTGGCAACAAATGGAGCTGAAATTTACATAGCTTTTCAGCTGCAAACCACAATTCCATTTGGGAAGCAACCGATTTTATTGGCTTTCAGTACTAAACATCCACTGAACCACCATCTATCAAAACATGTTGACAAAACGGCAATTATATTTGATTTTTCTTCAGGTTCTACTGGCCCAGTATCCAATGGGTTGATTCACATGAGAAAGAGCCATGGAATAGTGGGTATAATTGGGTGGGGCCTAATCCTGCCAGTGGGGGCAATTATTGCTAGATACTTCAGGTATAAGGATCCCCTATGGTTCTATCTCCATTCAGTCATTCAATTTGTGGGATTTTCATTTGGGCTTGGCACAGTCCTTCTTGGATTACAACTCTATAGAAACATGCATGTCCACATACCAGCTCACAGAGGCATAGGCATCTTTGTCCTTGTCCTAAGTATTCTTCAGATATTGGCATTTTTCTTGAGGCCAGACAAGGATTCCAAGTATCGAAACATTTGGAATTTGTATCACGGTTGGTTTGGAAGAATGGCACTTTTCTTTGCAGCATTGAATATAGTGTTGGGGATGCGAGCTGCGGGGGCAGGGAATGATTGGAAGGCAGGCTATGGATTCCTTCTTAGCATTGTACTTGTGGCAGTTATCGTTCTGGAAGTGTTGGCGTATTTGAAAAGGTCAGAAAAGCGTTCTCTTCCTCAGACTTTCCAAATGGACCCAGTTGGAGAGGCTAACTTTCCAACAAATCTAGCTAAAGGGTGA 1224 0.4257 MAKPRSWTQIWPSIVGVCLLNFVLNFKIVAVADDTGSNSIVSEGDCKNTNYQIFLPPPYQNISSTICKPVWHSYELRYTKTGDTTTIILSAPYTVGWVGIGFSRDGMMAGSSAMVGWINKHGHAKVKQFYLRGRRQSEVIIDKGELPLNTVPAAVATNGAEIYIAFQLQTTIPFGKQPILLAFSTKHPLNHHLSKHVDKTAIIFDFSSGSTGPVSNGLIHMRKSHGIVGIIGWGLILPVGAIIARYFRYKDPLWFYLHSVIQFVGFSFGLGTVLLGLQLYRNMHVHIPAHRGIGIFVLVLSILQILAFFLRPDKDSKYRNIWNLYHGWFGRMALFFAALNIVLGMRAAGAGNDWKAGYGFLLSIVLVAVIVLEVLAYLKRSEKRSLPQTFQMDPVGEANFPTNLAKG* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g2194 407 PANTHER MEMBRANE PROTEIN-LIKE 13 393 - -
Gso3g2194 407 CDD DOMON_DOH 74 139 IPR045266 -
Gso3g2194 407 SUPERFAMILY CBD9-like 75 133 - -
Gso3g2194 407 SMART 561_7 224 345 IPR006593 -
Gso3g2194 407 SMART DOMON_3 97 184 IPR005018 -
Gso3g2194 407 ProSiteProfiles DOMON domain profile. 72 186 IPR005018 -
Gso3g2194 407 Gene3D - 200 386 - -
Gso3g2194 407 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 13 393 - -
Gso3g2194 407 CDD Cyt_b561_FRRS1_like 204 374 - -
Gso3g2194 407 ProSiteProfiles Cytochrome b561 domain profile. 187 381 IPR006593 -
Gso3g2194 407 Pfam DOMON domain 76 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g2194 Gso-Chr3 47119017 47122100 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g2194 - - gmx:100782231 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2150 19 50004900 50008082 Gso3g2194 3 47119017 47122100 GST
Gso3g2194 3 47119017 47122100 Gso7g0495 7 4966101 4969521 PCT
Gso3g2194 3 47119017 47122100 Gso16g0201 16 2340357 2343240 PCT
Gso7g0495 7 4966101 4969521 Gso3g2194 3 47119017 47122100 PCT
Gso16g0201 16 2340357 2343240 Gso3g2194 3 47119017 47122100 PCT