Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2150 ATGGCAAAGCCAAGATCTTGGACTCAGATATGGTCTTCTATTGTCGGAGTGTGTGTTCTGAATTTTGTTCTGAACTTCAAGATCGTGGCAGTAGCAGATGACACTGGAAGCAACAGTATTGTATCAGAAGGTGACTGCAAGAACACAAATTATCAGATTTTCCTCCCTCCACCTTATCAGAATATATCCTCTACCATATGCAAACCTGTTTGGCATTCATACGAATTGAGGTACACCAAGACGGGTGACACCACAACTATCATATTATCTGCTCCATACACTGTGGGGTGGGTGGGAATTGGATTTTCAAGGGATGGGATGATGGCTGGTTCCAGTGCAATGGTGGGATGGATTAACAAACATGGCCATGCAAAAGTCAAGCAGTTTTATCTAAGGGGTAGGAGGCAATCAGAAGTAATTATAGACAAAGGTGAACTGCCTCTAAATACTGTGCCTGCTGCGGTGGCAACAAATGGGGCTGAAATTTACATAGCTTTTCAGCTGCAAACCACAATTCCATTTGGGAAGCAACCAATTTTATTGGCTTTCAGTACTAAACATCCACTGAACCACCATCTATCAAAACATGTTGACAAAGCAGCAATTATATTTGATTTCTCTTCAGGTTCTACGGGCCCGGTATCGAATGGGTTGATTCACATGAGAAAGAGCCATGGAATAGTGGGTATAATTGGGTGGGGCCTAATCCTGCCTGTGGGGGCAATTATTGCTAGGTACTTCAGGCATAAGGATCCCCTATGGTTTTATCTCCATTCAGTCATTCAATTTGTGGGATTTTCATTTGGGCTTGGCACAGTCCTTCTTGGATTACAACTCTATAGAAACATGCATGTCCACATACCAGCTCACAGAGGCATAGGCATCTTTGTCCTTGTCCTAAGTATTCTTCAGATATTGGCATTCTTCTTGAGGCCAGACAAGGATTCCAAGTATCGAAACATTTGGAATTTGTATCACAGTTGGTTTGGAAGAATGGCACTTTTCTTTGCAGCATTGAATATAGTCCTGGGGATGCGAGCTGCGGGAGCAGGGAATGATTGGAAGGCAGGCTATGGGTTCCTTCTTAGCATTGTACTTGTCGCAGTTATCGTTCTGGAAGTCTTGGCGTATTTGAAAAGGTCAGAAAAGCGTTCTCTTCCTCAGACTTTCCAAATGGACCCAGTTGGAGATGCTAACTTCCCAACCAATCTAGCTAAAGGGTGA 1224 0.4338 MAKPRSWTQIWSSIVGVCVLNFVLNFKIVAVADDTGSNSIVSEGDCKNTNYQIFLPPPYQNISSTICKPVWHSYELRYTKTGDTTTIILSAPYTVGWVGIGFSRDGMMAGSSAMVGWINKHGHAKVKQFYLRGRRQSEVIIDKGELPLNTVPAAVATNGAEIYIAFQLQTTIPFGKQPILLAFSTKHPLNHHLSKHVDKAAIIFDFSSGSTGPVSNGLIHMRKSHGIVGIIGWGLILPVGAIIARYFRHKDPLWFYLHSVIQFVGFSFGLGTVLLGLQLYRNMHVHIPAHRGIGIFVLVLSILQILAFFLRPDKDSKYRNIWNLYHSWFGRMALFFAALNIVLGMRAAGAGNDWKAGYGFLLSIVLVAVIVLEVLAYLKRSEKRSLPQTFQMDPVGDANFPTNLAKG* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2150 407 CDD DOMON_DOH 74 139 IPR045266 -
Gso19g2150 407 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 9 393 - -
Gso19g2150 407 Gene3D - 200 386 - -
Gso19g2150 407 SMART DOMON_3 97 184 IPR005018 -
Gso19g2150 407 ProSiteProfiles DOMON domain profile. 72 186 IPR005018 -
Gso19g2150 407 CDD Cyt_b561_FRRS1_like 204 374 - -
Gso19g2150 407 SUPERFAMILY CBD9-like 75 130 - -
Gso19g2150 407 SMART 561_7 224 345 IPR006593 -
Gso19g2150 407 Pfam DOMON domain 76 140 - -
Gso19g2150 407 ProSiteProfiles Cytochrome b561 domain profile. 187 381 IPR006593 -
Gso19g2150 407 PANTHER MEMBRANE PROTEIN-LIKE 9 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2150 Gso-Chr19 50004900 50008082 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2150 - - gmx:100792152 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2150 19 50004900 50008082 Gso3g2194 3 47119017 47122100 GST
Gso19g2150 19 50004900 50008082 Gso7g0495 7 4966101 4969521 PCT
Gso19g2150 19 50004900 50008082 Gso16g0201 16 2340357 2343240 PCT
Gso7g0495 7 4966101 4969521 Gso19g2150 19 50004900 50008082 PCT
Gso16g0201 16 2340357 2343240 Gso19g2150 19 50004900 50008082 PCT