Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0201 ATGGCAAATAGTAGATCTTGGACTCAAACATGGCCATGTTTTGTCAAGCTAGGTGTTCTGAATCTTGTCTTGGTTTTCAAAATCACAGCATTGGGGGATGTCAGTGGAAGTGTTACAGCAGAAAACACTTGCAAGAACACAAATTATCAAAGTTTTCTCCCTCCACCGTACCAGAATATGTCCCAAATGATATGCACACCTGTATGGCACACCTATGAATTGAGGTATTTCCAGAATGGTGATACAACAACTATCATATTATCTGCTCCCTACACAATAGGGTGGGTAGGAATTGGATTTTCTAGAGATGGAATGATGGTTGGTTCCAGTGCAATGGTGGGATGGATTACCAAACATGGTCATGCAAACATGAAGCAATTTTACCTAAGGGGTAGGAAGTCATCAGAAGTCAAAATAGACAAAGGTGAACTCCCCCTCAATAATATCCCTTCGGCTGTGGCGACTAATGGAGCTGAAATTCATATGGCATTTCAGTTGCAGATGACAACCCCATTTCAGAAACAACCAATTTTGTTGGCTTTTGGTAGCAAATATCCACAGAACCACCACCTCTCCAAGCATGAAGACAAAACAGCTATTGTGTTTGACTTCTCTGCAGGTTCTACGGGTCCTGTATCCCGTGAATTGATTCAGATGAGGACGAACCATGGAATTTTGGCTATAATAGGGTGGGGTCTAATCCTGCCTGTAGGGGCTATTATTGCTAGATATTTCAGGCACAAGGATCCCTTATGGTTCTATCTCCATGCAATCATTCAGTTTGTAGGATTCACATTTGGGCTTGGTACAGTAATTCTTGGATTACAACTCTATTCCAAAATGCAAGTCCATATACCAGCTCACAGAGGCATAGGCATCTTTGCTCTGGTACTAAGTATTCTTCAGGTGTTGGCACTCTTCTTGAGACCAAACAAGGATTCCAAGATTCGAAAATTTTGGAATTGGTACCACAGTTGGTTTGGAAGGATGGCACTTGTATTTGCAGCCATTAACATAGTGTTGGGGATGCAAGCTGCGGGGGCAGGAAGTGATTGGAAGATAGGCTACGGATTCGTTTTTGGCATTATGGTTGTTGCGGCTATTGTTCTTGAAATATTGGCTTATTTGAAAAGATCAGAGATGCGTTCTCTACCTCCTAACTTCCAATTGGATCCTGTTGGAGGAGCTACATTTCCAAGGGGAATGTGA 1209 0.4227 MANSRSWTQTWPCFVKLGVLNLVLVFKITALGDVSGSVTAENTCKNTNYQSFLPPPYQNMSQMICTPVWHTYELRYFQNGDTTTIILSAPYTIGWVGIGFSRDGMMVGSSAMVGWITKHGHANMKQFYLRGRKSSEVKIDKGELPLNNIPSAVATNGAEIHMAFQLQMTTPFQKQPILLAFGSKYPQNHHLSKHEDKTAIVFDFSAGSTGPVSRELIQMRTNHGILAIIGWGLILPVGAIIARYFRHKDPLWFYLHAIIQFVGFTFGLGTVILGLQLYSKMQVHIPAHRGIGIFALVLSILQVLALFLRPNKDSKIRKFWNWYHSWFGRMALVFAAINIVLGMQAAGAGSDWKIGYGFVFGIMVVAAIVLEILAYLKRSEMRSLPPNFQLDPVGGATFPRGM* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0201 402 Pfam DOMON domain 73 138 - -
Gso16g0201 402 SMART 561_7 222 343 IPR006593 -
Gso16g0201 402 CDD Cyt_b561_FRRS1_like 207 372 - -
Gso16g0201 402 CDD DOMON_DOH 71 199 IPR045266 -
Gso16g0201 402 Gene3D - 198 383 - -
Gso16g0201 402 PANTHER MEMBRANE PROTEIN-LIKE 30 390 - -
Gso16g0201 402 SMART DOMON_3 95 182 IPR005018 -
Gso16g0201 402 Pfam Eukaryotic cytochrome b561 223 344 IPR006593 -
Gso16g0201 402 ProSiteProfiles Cytochrome b561 domain profile. 185 379 IPR006593 -
Gso16g0201 402 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 30 390 - -
Gso16g0201 402 ProSiteProfiles DOMON domain profile. 70 182 IPR005018 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0201 Gso-Chr16 2340357 2343240 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0201 - - gmx:100778214 816.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0495 7 4966101 4969521 Gso16g0201 16 2340357 2343240 GST
Gso19g2150 19 50004900 50008082 Gso16g0201 16 2340357 2343240 PCT
Gso3g2194 3 47119017 47122100 Gso16g0201 16 2340357 2343240 PCT
Gso16g0201 16 2340357 2343240 Gso19g2150 19 50004900 50008082 PCT
Gso16g0201 16 2340357 2343240 Gso3g2194 3 47119017 47122100 PCT