Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g2183 ATGTTAGAGAAAGTGGAGGAGTTTAACATGGATAAAGTTATACAAGAGTTTGAATTATTGACAAGGGATGCAGAAAGAGTTCAGAGGGAAACACTCAAGAGGATTTTGGAGGATAACGCATCAGCAGAGTACTTGCAGAGTTTGGGTCTCAATGGAAGAACTGACCCTGAGAGTTTCAAGGCCTGTGTTCCAATGGTCACCCACAAAGAATTGGAACCTTATATCTACAGAATTATTGATGGTGATGCTTCTCCTATTCTCACTGGAAAACCCATCACAACCATGTCCTTAAGTTCTGGCACTACCCAGGGGAAACCAAAGTATGTACCTTGGAATGATGAATTGTATGAAACCACAATGCAGATATACCAGACCTCTTTTGCCTTTAGAAACAGGGAGTTTCCTATAAAAAATGGGAAGGCTTTAAGCTTTATATACGGTAGCAAACAGTTGAAAACAAAGGGGGGTCTGGCGGCTAGAACTGCCACAAGCAACGTGTTCTGTAGTGCTGGTTACAAGTGTGCAATGAGGGCACTCCAATCCCAATGCTGCAGCCCGGATGAAGTGATATTTGGTCCTGATTTTTTCCAATCACTGTACTGCCATCTGCTGTGTGGTCTGATTTTCCGGGAGGAAGTTGAGTTTGTATCTTCCACATTTGCACATAGCATTGTCCATGCTTTTAGAACCTTTGAACAAGTGTGGGAAGAGCTGTGCAATGATATCAGAGAAGGGGTTCTCACCAGAAATGTCACCGTTCCTTCCATTCGAATGGCCATGTCTAAACTGCTCAAACCAAACCCTGAATTAGCAAACGCGATCCACAAAAAATGCACGGGATTGAGCAACTGGTACGGGTTGATACCGGAGCTTTTTCCCAATGCAAAGTATATTTATGGCATCATGACCGGGTCGATGGAACCTTATTTGAAAAAAATGAGACATTATGCCGGGGAGCTGCCTTTGTTGACTGCTGACTATGGATCCTCTGAGGGATGGATAGCAGCAAATGTGAACCCACAACTTCCTCCCGAGTATGCCACTTATGCCGTGCTTCCTCACATTGGTTACTTTGAATTCATTCCTCTCTTAGAGCTTGAGAACACCAAGCCTCTGGGCCTGACTCAAGTCAAGGTTGGTCAAGAGTATGAAATTGTTATGACAAATCCAGCAGGTTTATACCGTTATAGATTGGGGGATGTGGTGAAGGTTATGGGATTCCACAATTCAACTCCAGAACTCAAGTTTATTCGAAGGAGCAGTCTTCTGCTCAACATTAACATCGACAAGAACACTGAGAAGGATTTACAATTAGCCGTGGAAGCTGCAGGGAAGTTGCTAGCAGAGGAGAAACTGGAAGTAGTTGACTTCAGTAGCCAGGTTGATTTATCCAAAGAACCAGGGCACTATGTCATCTTCTGGGAAATCAGCGGAGAAGCGAGCCAAGAACTACTCCATGAATGCTGTAACTGTTTGGACAAGTCTTTCGTTGATGCAGGCTACACCAGTTCGCGCAAAGTGAACTGCATTGGTGCCCTCGAACTACGACTTGTTCGGAGAGGAACATTCCAGAAGATTCTTGATCATTACCTAGGACTAGGAACCGCTGTTAGTCAGTACAAGACACCAAGATGTGTTGGTCCTACAAACACCAGAGTGTTGCAAATCTTGAGTGAAAATGTTGTCAACAACTATCTCAGTACCGCTTTCAATTGA 1716 0.44 MLEKVEEFNMDKVIQEFELLTRDAERVQRETLKRILEDNASAEYLQSLGLNGRTDPESFKACVPMVTHKELEPYIYRIIDGDASPILTGKPITTMSLSSGTTQGKPKYVPWNDELYETTMQIYQTSFAFRNREFPIKNGKALSFIYGSKQLKTKGGLAARTATSNVFCSAGYKCAMRALQSQCCSPDEVIFGPDFFQSLYCHLLCGLIFREEVEFVSSTFAHSIVHAFRTFEQVWEELCNDIREGVLTRNVTVPSIRMAMSKLLKPNPELANAIHKKCTGLSNWYGLIPELFPNAKYIYGIMTGSMEPYLKKMRHYAGELPLLTADYGSSEGWIAANVNPQLPPEYATYAVLPHIGYFEFIPLLELENTKPLGLTQVKVGQEYEIVMTNPAGLYRYRLGDVVKVMGFHNSTPELKFIRRSSLLLNINIDKNTEKDLQLAVEAAGKLLAEEKLEVVDFSSQVDLSKEPGHYVIFWEISGEASQELLHECCNCLDKSFVDAGYTSSRKVNCIGALELRLVRRGTFQKILDHYLGLGTAVSQYKTPRCVGPTNTRVLQILSENVVNNYLSTAFN* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g2183 571 Coils Coil 10 30 - -
Gso3g2183 571 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 571 IPR004993 -
Gso3g2183 571 Pfam GH3 auxin-responsive promoter 16 546 IPR004993 -
Gso3g2183 571 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 1 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g2183 Gso-Chr3 47020555 47024867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g2183 14 568 EF-hand Containing Proteins AT1G23160 38.947 1.12e-135 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g2183 K14506 - gmx:100777944 1154.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2135 19 49880929 49885796 Gso3g2183 3 47020555 47024867 GST
Gso3g2183 3 47020555 47024867 Gso7g0513 7 5192194 5196729 PCT
Gso3g2183 3 47020555 47024867 Gso16g0221 16 2589977 2594653 PCT
Gso7g0513 7 5192194 5196729 Gso3g2183 3 47020555 47024867 PCT
Gso16g0221 16 2589977 2594653 Gso3g2183 3 47020555 47024867 PCT