Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0221 ATGTTGGAGAAAGTTGAAGAATTTAACATAGAGAGGGTGATGGAGGAATTTGAGAGGGTGACAAAGGATGCTGAGAGGATTCAAAAGGAAACCCTGAAGAGGATTTTGGAAGATAATGCTTCTGCTGAGTACTTGCTGAATTTGGGGTTGAATGGGAGGACTGATCCTGAGAGCTTCAAGGCCTTTGTTCCACTTGTTACTCACAAAGATTTAGAGCCTTATATCAATAGAATACTTGATGGTGATTTTTCTTCTGTTCTCACTGGCAAACCGATCACAACCATGTCTTTGAGTTCTGGGACCACTCAGGGAAAGCCAAAATATGTACCATGGAATGATAAACTGTTTGACACCACATTGCAGATATACCACACCTCTTTTGCCTTCAGAAACAGGGAATTTCCCATAAACGGCGGCAAGGCCTTGGGCTTTATCTACAGCAGCAAGCAGTTCAAAACCAAAGGGGGTGTGCTAGCAGGAACTGCCACAACCAATGTGTTCCGAAACCCAGGTTTCCGGCATGCGATGAAGACGACTCAGTCCCCATTTTGCAGCCCTGATGAAGTCATATTTGGTCCTGATTTTCACCAATCCTTGTACTGCCACCTCTTGTGTGGCCTAATCTTCAGGGAAGAAGTTCAGTTGGTGTCTTCCACATTTGCACACAGCATTGTCTATGCTTTCAGGACTTTTGAGCAAGTTTGGGAGGAGCTTTGTGTTGATATCAAGGAAGGTGTCCTTAACAGCAAGGTTACAGTGCCCTCCGTTAGGGCAGCAATGTCTAAGCTCCTAAAACCTGACCCTGAACTAGCCAATTTGATCCACAGCAAGTGCATGGGGCTTAGCAACTGGTATGGCCTAATACCAGAGCTTTTCCCCAATGTTAAGTATGTTCATGGCATCATGACTGGGTCAATGGAACCTTATTTGAAAAAATTGAGGCATTATGGTGGAGAGTTGCCTTTGTTGACTTCTGACTATGGATCTTCTGAAGGGTGGATAGGAACAAATGTGAAACCAACAGTGCCACCTGAATTGGCCACCTACACTGTGCTTCCTCAAATTGGCTACTTTGAATTCATCCCTCTGAGAGAGCTAGAAGGAGCTAAGGGAGATTCTAGTTTCCTTTGTATGGAAGCTAAGCCTGTGGGGCTCACTGAGGTGAAAATTGGTGAAGAATATGAGATTGTCGTCACCAATCCAGCAGGCTTGTACAGGTACCGGCTAGGTGATGTGGTCAAGGTTATGGGGTTCCATAATTCAGCTCCAGAAATAAAGTTTGTTCGGCGTAGCAACCTTCTTCTAACCATCAACATAGACAAGAACACAGAGAAAGATCTGCAGTTGGCTGTGGAAGCAGCATCAGAATTGTTGGCAGAGGAGAAATTGGAAGTTGTTGACTACACTAGCCACATAGATTTGTCAAAGGAGCCAGGACACTATGTAATCTTCTGGGAAATAAGTGGTGAAGCAAGTGAAGAAGTGCTTGGTGGATGCTGCAACGGAATGGACAAGTCTTTTGTTGATGCTGGTTACACCAGCTCTCGCAAAGTCAACTGCATCGGGGCCCTCGAGCTCCGACTTGTTCGTAGAGGAACATTCCAGAAGATACTTGAGCACTCCCTTGCACTAGGAGCTGCTGTGAGCCAGTTCAAGACACCAAGATGTGTAGGCCCTACAAACACCAAAGTGTTGCAAATATTGAATGAAAATGTTGTCAAGAGCTATCTCAGCACTGCCTTCAATTGA 1749 0.4505 MLEKVEEFNIERVMEEFERVTKDAERIQKETLKRILEDNASAEYLLNLGLNGRTDPESFKAFVPLVTHKDLEPYINRILDGDFSSVLTGKPITTMSLSSGTTQGKPKYVPWNDKLFDTTLQIYHTSFAFRNREFPINGGKALGFIYSSKQFKTKGGVLAGTATTNVFRNPGFRHAMKTTQSPFCSPDEVIFGPDFHQSLYCHLLCGLIFREEVQLVSSTFAHSIVYAFRTFEQVWEELCVDIKEGVLNSKVTVPSVRAAMSKLLKPDPELANLIHSKCMGLSNWYGLIPELFPNVKYVHGIMTGSMEPYLKKLRHYGGELPLLTSDYGSSEGWIGTNVKPTVPPELATYTVLPQIGYFEFIPLRELEGAKGDSSFLCMEAKPVGLTEVKIGEEYEIVVTNPAGLYRYRLGDVVKVMGFHNSAPEIKFVRRSNLLLTINIDKNTEKDLQLAVEAASELLAEEKLEVVDYTSHIDLSKEPGHYVIFWEISGEASEEVLGGCCNGMDKSFVDAGYTSSRKVNCIGALELRLVRRGTFQKILEHSLALGAAVSQFKTPRCVGPTNTKVLQILNENVVKSYLSTAFN* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0221 582 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 582 IPR004993 -
Gso16g0221 582 Coils Coil 10 30 - -
Gso16g0221 582 Pfam GH3 auxin-responsive promoter 16 557 IPR004993 -
Gso16g0221 582 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 1 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0221 Gso-Chr16 2589977 2594653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0221 14 579 EF-hand Containing Proteins AT1G23160 39.243 4.90e-138 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0221 K14506 - gmx:100806209 1159.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0513 7 5192194 5196729 Gso16g0221 16 2589977 2594653 GST
Gso19g2135 19 49880929 49885796 Gso16g0221 16 2589977 2594653 PCT
Gso3g2183 3 47020555 47024867 Gso16g0221 16 2589977 2594653 PCT
Gso16g0221 16 2589977 2594653 Gso19g2135 19 49880929 49885796 PCT
Gso16g0221 16 2589977 2594653 Gso3g2183 3 47020555 47024867 PCT