Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2135 ATGTTAGAGAAAGTGGGGGAGTTTAACATGGATAAAGTTATACAAGAGTTTGAATTATTGACACGGGATGCAGAAAGGGTTCAGAGGGAAACACTGAAGAGGATTTTGGAGGATAACGCATCAGCAGAGTACTTGCAGAGTTTGGGTCTCAATGGAAGAACTGACCCTGAGAGTTTCAAGGCCTGTGTTCCACTGGTCACCCACAAAGAATTGGAACCTTATATCTACAGAATTATTGATGGTGATGCTTCTCCTATTCTCACTGGAAAACCCATCACAACCATGTCATTAAGTTCTGGCACTACCCAGGGGAAGCCAAAATATGTACCTTGGAATGATGAATTGTATGAAACCACAATGCAGATATACCAGACCTCTTTTGTCTTTAGAAACAGGGAGTTTCCTATAAAAAATGGGAAGGCTTTAAGCTTTATATACGGTAGCAAACAGTTGAAAACAAAGGGGGGTCTGGCGGCTAGAACTGCCACGAGCAACGTGTTCTGTAGTGCTGGTTACAAGTGTGCAATGAGGGCACTCCAATCCCAATGCTGCAGCCCGGATGAAGTGATATTTGGTCCTGATTTTTTCCAATCACTGTACTGCCATCTGTTGTGTGGTCTGATTTTCCGGGAGGAAGTTCAGTTTGTGTCTTCCACATTTGCACATAGCATTGTCCATGCTTTTAGAACCTTTGAACAAGTGTGGGAAGAGCTGTGTAACGATATCAGAGAAGGGGTTCTCACCAGAAATGTCACCATTCCTTCCATTCGAATGGCCATGTCTAAACTGCTCAAACCAAACCCTGAATTAGCCAACACGATCCACCAAAAATGCAGGGGATTGAGCAACTGGTACGGGTTAATACCAGAGCTTTTTCCTAATGCAAAGTATATTTATGGCATCATGACTGGGTCGATGGAGCCTTATTTGAAAAAAATGAGGCATTATGCTGGGGAGCTGCCTTTGTTGACTGCTGACTACGGATCTTCTGAGGGATGGATAGCAGCTAATGTGAACCCACAACTTCCTCCTGAGTATGCCACTTATGCTGTGCTTCCTCACATTGGTTACTTTGAATTCATTCCTCTCTCAGAGTTTGAGAACACCAAGGGTGAACCTGATTTCCTCTGTGTTGATCCTAAGCCCATGGGCCTGACTGAAGTCAAGGTTGGTGAAGAGTATGAAATTGTTATGACGAATCCAGCAGGTTTATACCGGTATAGATTAGGGGATGTGGTGAAGGTTATGGGATTCCACAATTCAACTCCAGAACTCAAGTTTATTCGAAGGAGCAGTCTTCTGCTCAACATTAACATCGACAAGAACACTGAGAAGGATTTACAATTAGCCGTGGAAGCTGCAGGGAAGTTGCTAGCAGAGGAGAAACTGGAAGTAGTTGACTTCAGTAGCCAGGTTGATTTATCCAAAGAACCAGGGCACTATGTCATCTTCTGGGAAATCAGCGGAGAAGCGAGCCAAGAACTACTCCTCGAATGCTGTAACTGTTTGGACAAGTCTTTCGTTGATGCAGGCTACACCAGTTCGCGCAAAGTGAACTGCATTGGTGCCCTCGAACTACGACTTGTTCGGAGAGGAACATTCCAGAAGATTCTTGATCATTACCTAGGACTAGGAACCGCTGTTAGTCAATACAAGACACCAAGATGTGTTGGTCCTACAAACACCAGAGTTTTGCAAATCTTGAGTGAAAATGTTGTGAACAACTATCTCAGTACCGCTTTCAATTGA 1749 0.4391 MLEKVGEFNMDKVIQEFELLTRDAERVQRETLKRILEDNASAEYLQSLGLNGRTDPESFKACVPLVTHKELEPYIYRIIDGDASPILTGKPITTMSLSSGTTQGKPKYVPWNDELYETTMQIYQTSFVFRNREFPIKNGKALSFIYGSKQLKTKGGLAARTATSNVFCSAGYKCAMRALQSQCCSPDEVIFGPDFFQSLYCHLLCGLIFREEVQFVSSTFAHSIVHAFRTFEQVWEELCNDIREGVLTRNVTIPSIRMAMSKLLKPNPELANTIHQKCRGLSNWYGLIPELFPNAKYIYGIMTGSMEPYLKKMRHYAGELPLLTADYGSSEGWIAANVNPQLPPEYATYAVLPHIGYFEFIPLSEFENTKGEPDFLCVDPKPMGLTEVKVGEEYEIVMTNPAGLYRYRLGDVVKVMGFHNSTPELKFIRRSSLLLNINIDKNTEKDLQLAVEAAGKLLAEEKLEVVDFSSQVDLSKEPGHYVIFWEISGEASQELLLECCNCLDKSFVDAGYTSSRKVNCIGALELRLVRRGTFQKILDHYLGLGTAVSQYKTPRCVGPTNTRVLQILSENVVNNYLSTAFN* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2135 582 Coils Coil 10 30 - -
Gso19g2135 582 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 582 IPR004993 -
Gso19g2135 582 Pfam GH3 auxin-responsive promoter 16 557 IPR004993 -
Gso19g2135 582 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 1 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2135 Gso-Chr19 49880929 49885796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g2135 14 579 EF-hand Containing Proteins AT1G23160 38.726 1.38e-135 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2135 K14506 - gmx:100794598 1177.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2135 19 49880929 49885796 Gso3g2183 3 47020555 47024867 GST
Gso19g2135 19 49880929 49885796 Gso7g0513 7 5192194 5196729 PCT
Gso19g2135 19 49880929 49885796 Gso16g0221 16 2589977 2594653 PCT
Gso7g0513 7 5192194 5196729 Gso19g2135 19 49880929 49885796 PCT
Gso16g0221 16 2589977 2594653 Gso19g2135 19 49880929 49885796 PCT