Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1968 ATGAGTGAAGCAACGGCAAGATTCGAACGGCGGGTCCTGGTGGCGGTGGACGAAGGCGAGGAGAGCATGTACGCTCTTTCTTGGAGCCTCAGGAACGTAATTTTCCAAAATTCCAGAGATACCCTTATCCTTCTTTACGTCAAGCCCCCTCATGCCGTTTATTCCCCCTTAGATTCCACTGGCAGGATAGATGATCCTGAAACTCCAGGATATTTGTTTTCGCCGGACATAAGTGCGGCCATCGAGAAGTACAGCCAAGAAGTGGCAGATTGCGTGTTAGAGAAAGCCAAGAAATTGTGTAAAGATCTCCAAAACGTCATGGTGGAAACGCGGGTAGAAAGTGGAGACCCAAGGGATGTGATCTGTGATATGTCTCAAAAGTTAGGTGCTGACTTGTTAATCATGGGTAGCCACGGCTATGGAGTTGTAAAGAGGGCTTTCCTTGGAAGTGTGAGCAATTACTGCTCACAGAACGTGAAGTGCCCAGTTTTGATAGTCAAGAAGCCAAAACCATCTGCTGGTGCTGGAAAATGA 534 0.4775 MSEATARFERRVLVAVDEGEESMYALSWSLRNVIFQNSRDTLILLYVKPPHAVYSPLDSTGRIDDPETPGYLFSPDISAAIEKYSQEVADCVLEKAKKLCKDLQNVMVETRVESGDPRDVICDMSQKLGADLLIMGSHGYGVVKRAFLGSVSNYCSQNVKCPVLIVKKPKPSAGAGK* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1968 177 Coils Coil 93 113 - -
Gso3g1968 177 PRINTS Universal stress protein signature 9 27 IPR006015 -
Gso3g1968 177 PRINTS Universal stress protein signature 127 139 IPR006015 -
Gso3g1968 177 PRINTS Universal stress protein signature 145 167 IPR006015 -
Gso3g1968 177 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 2 173 - -
Gso3g1968 177 Gene3D HUPs 5 175 IPR014729 -
Gso3g1968 177 CDD USP_Like 11 166 - -
Gso3g1968 177 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 10 169 - -
Gso3g1968 177 Pfam Universal stress protein family 10 167 IPR006016 -
Gso3g1968 177 PANTHER OS05G0357525 PROTEIN 2 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1968 Gso-Chr3 45209140 45211052 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1968 - - gmx:100527623 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1928 19 47995463 47996932 Gso3g1968 3 45209140 45211052 GST
Gso3g1968 3 45209140 45211052 Gso10g1352 10 39921813 39923054 PCT
Gso10g1352 10 39921813 39923054 Gso3g1968 3 45209140 45211052 PCT