Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1352 ATGGCAGAAGAACAACAACGACGGATCCTGGTGGCCGTGGATGAAGGCGAGGAGAGCATGTATGCTCTCTCATGGTGCCTTAAGAACCTTGCTTTTCAAAATTCCAAAGACACCCTTCTTCTTCTCTACGTCAAACCCCCTCGAGTCACTTATTCAGCCTTCGATGGCACAGGATATTTGTTTTCCTCTGACATAACGGCTACCATGGAGAGGTATAGCCAACAAGTGGCCGATTGCGTCTTGGAGAAAGCCAAGAAATTGTGTAACAATATTGAAAATGTAGAGACGAGGGTAGAGAATGGCGATCCAAGGGACGTGATTTGTCAGATGGTTCAAAAGTTGGGTGCTGATGTCTTAGTCATGGGAAGCCATGGTTATGGTCTCATCAAGAGGGCTTTCCTTGGAAGCGTCAGCAATCACTGTGCACAGAACGTGAAGTGCCCGGTTTTGATTGTTAAGAAGCCAAAACCAACCACCGGAGAAACATAA 489 0.4663 MAEEQQRRILVAVDEGEESMYALSWCLKNLAFQNSKDTLLLLYVKPPRVTYSAFDGTGYLFSSDITATMERYSQQVADCVLEKAKKLCNNIENVETRVENGDPRDVICQMVQKLGADVLVMGSHGYGLIKRAFLGSVSNHCAQNVKCPVLIVKKPKPTTGET* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1352 162 Coils Coil 77 97 - -
Gso10g1352 162 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 3 158 - -
Gso10g1352 162 CDD USP_Like 8 152 - -
Gso10g1352 162 Pfam Universal stress protein family 7 153 IPR006016 -
Gso10g1352 162 Gene3D HUPs 2 161 IPR014729 -
Gso10g1352 162 PRINTS Universal stress protein signature 6 24 IPR006015 -
Gso10g1352 162 PRINTS Universal stress protein signature 113 125 IPR006015 -
Gso10g1352 162 PRINTS Universal stress protein signature 131 153 IPR006015 -
Gso10g1352 162 PANTHER OS05G0357525 PROTEIN 3 158 - -
Gso10g1352 162 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 7 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1352 Gso-Chr10 39921813 39923054 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1352 - - gmx:100305594 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1928 19 47995463 47996932 Gso10g1352 10 39921813 39923054 PCT
Gso3g1968 3 45209140 45211052 Gso10g1352 10 39921813 39923054 PCT
Gso10g1352 10 39921813 39923054 Gso19g1928 19 47995463 47996932 PCT
Gso10g1352 10 39921813 39923054 Gso3g1968 3 45209140 45211052 PCT