Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1911 ATGGATACTTCTCGCAGAATTTCTGGATTCAAGTACGATTGTTTGCTTTTGGATATGGACGATACTCTCTACCCATTGAGCACAGGTCTCAATTTGGCATGTCGAAAGAACATAGAAGGGTATATGTTGAAACATCTGCTGATGGAAGAAAGTGAAGTACCAAAGCTTTGCGTGGATTTGTACAGGGAGTATGGGACAACTATGGCAGGACTAAAGGCCTTTGGTTATGAGTTTGACAATGATGAATTTCATGCCTACGTGCATGGAAGATTACCATACGAGAAACTGAAGCCAGATCCAGTGTTAAGGAGCCTTCTGCTTTCCATGCCTCAGCGTAAAATAGTATTCACTAATGCAGATCAAGCACATGCACACCAAGTTCTCAACAGATTGGGGTTGAACGATTGTTTTGATGGCATCATATGCTTTGAAACGCTTAATCCGCCTAATTACACAAATGTACCTACTGATACTCACTTGCTAACATGGAGTAAGTCGTTTAACAAAGACTGTAACCAAGTAGAGAGCGGATGTTTCAACTCCAAGACACAAATCCTATGCAAACCCTCTGTGGAAGCCATTGAAGCTGCCATTCAGATTGCTAATGTAGATCCAAGGAAAACGTTGTTTTTTGATGACAGTGCAAGAAACATTGCAAGTGGGAAAGCTGCTGGACTTAACACAGTTATTGTGGGACGCTCAGATTTGGTGCCTGGTGCTGACTATGCACTGAATAGCATTCATAATATCAAAGAAGCATTGCCCAAAATATGGGAGGTTGAGGGAGAGCTACAGCAAATGATCCAATCCCCAGCAGTTGAAACCATGGTCCTTGCATAG 840 0.4226 MDTSRRISGFKYDCLLLDMDDTLYPLSTGLNLACRKNIEGYMLKHLLMEESEVPKLCVDLYREYGTTMAGLKAFGYEFDNDEFHAYVHGRLPYEKLKPDPVLRSLLLSMPQRKIVFTNADQAHAHQVLNRLGLNDCFDGIICFETLNPPNYTNVPTDTHLLTWSKSFNKDCNQVESGCFNSKTQILCKPSVEAIEAAIQIANVDPRKTLFFDDSARNIASGKAAGLNTVIVGRSDLVPGADYALNSIHNIKEALPKIWEVEGELQQMIQSPAVETMVLA* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1911 279 SFLD C1.5.3: 5'-Nucleotidase Like 11 259 IPR010237 -
Gso3g1911 279 SFLD Haloacid Dehalogenase 11 259 - -
Gso3g1911 279 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 186 231 IPR006439 -
Gso3g1911 279 SUPERFAMILY HAD-like 14 235 IPR036412 -
Gso3g1911 279 PANTHER OS07G0634400 PROTEIN 8 279 - -
Gso3g1911 279 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 8 279 - -
Gso3g1911 279 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 13 231 IPR010237 -
Gso3g1911 279 CDD HAD_5NT 14 233 IPR010237 -
Gso3g1911 279 Gene3D - 72 258 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1911 Gso-Chr3 44664414 44668854 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1911 K18551 - gmx:100775435 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1875 19 47471854 47475079 Gso3g1911 3 44664414 44668854 GST
Gso3g1911 3 44664414 44668854 Gso10g1285 10 38880299 38882751 PCT
Gso10g1285 10 38880299 38882751 Gso3g1911 3 44664414 44668854 PCT