Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1285 ATGGATACTTCTTATAGGACTGGTGGAGTCAAGTACGAGTGCTTGCTTTTTGATATGGATGACACTCTTTACCCATTGAGCTTAGGTCTCAATTTGTTTTGTCGCAAGAACATACAAGAGTATATGTTAGAACTCTTGCATATTGAAGAGAGTGAAGTGCCAAAAATGTGTTTGGATTTGTATAGGGAATACGGGACAACTATGGCAGGATTAAAGGTCCTTGGTTATGAGTTTGACAATGACGAGTTTCATGCTTACGTGCATGGAAGGTTACCATACGAGAAACTGAAGCCTGATCCAGTATTAAGGAACCTTCTGCTTTCCATGCCTCAGCGTAAAATAATATTCACCAATGCAGATCATGCACATGCAGTTAAAGTTCTCAACAGATTGGGTTTGGAAGATTGTTTTGAGGGCATCATATGCTTTGAAACGCTTAATCCTCCCAAACAAATCAATTGCATGGATGTACCAAATGATAATCATGTGCTCACAGATTTAACAGAAAATGGATGTTTCAATTCCCACCCACAAATCCTCTGTAAACCATCTGTGGAAGCCTTTGAAGCTGCTATTCGGATTGCTAATGTGGATCCAAAGAAAACAATTTTCTTTGATGACAGTGTTAGAAATGTTGAAAGTGCAAAAATAACTGGACTTAACACTGTTTTAGTGGGCCATTCAGATTTGGTCCCTGGAGCTGATCATGCCCTGAACAGCATTCATAATATCAAAGAAGCGTTACCTGAAATTTGGGAGATTGAAGATGGCAACCAACAGCAAAAGATTCAACCCCCAACAGTTGAAACCATGGTCCTAGCTTAA 825 0.3952 MDTSYRTGGVKYECLLFDMDDTLYPLSLGLNLFCRKNIQEYMLELLHIEESEVPKMCLDLYREYGTTMAGLKVLGYEFDNDEFHAYVHGRLPYEKLKPDPVLRNLLLSMPQRKIIFTNADHAHAVKVLNRLGLEDCFEGIICFETLNPPKQINCMDVPNDNHVLTDLTENGCFNSHPQILCKPSVEAFEAAIRIANVDPKKTIFFDDSVRNVESAKITGLNTVLVGHSDLVPGADHALNSIHNIKEALPEIWEIEDGNQQQKIQPPTVETMVLA* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1285 274 Gene3D - 76 252 IPR023214 -
Gso10g1285 274 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 13 225 IPR010237 -
Gso10g1285 274 SFLD C1.5.3: 5'-Nucleotidase Like 11 254 IPR010237 -
Gso10g1285 274 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 180 225 IPR006439 -
Gso10g1285 274 CDD HAD_5NT 14 226 IPR010237 -
Gso10g1285 274 PANTHER OS07G0634400 PROTEIN 7 274 - -
Gso10g1285 274 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 11 254 - -
Gso10g1285 274 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 7 274 - -
Gso10g1285 274 SUPERFAMILY HAD-like 14 229 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1285 Gso-Chr10 38880299 38882751 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1285 K18551 - gmx:100814291 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1875 19 47471854 47475079 Gso10g1285 10 38880299 38882751 PCT
Gso3g1911 3 44664414 44668854 Gso10g1285 10 38880299 38882751 PCT
Gso10g1285 10 38880299 38882751 Gso19g1875 19 47471854 47475079 PCT
Gso10g1285 10 38880299 38882751 Gso3g1911 3 44664414 44668854 PCT