Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1855 ATGGCAACTATGACTGGTGTGAGCCTTTCAAGCCCCAGGGTTTTCTTCAACGCATCAGCCTCACCGCAAAACACGTACGCCGTAAAGTTCGCAGTTCCACTCAGCCAAGGGATGCGACTTGGTAGTGTCAGGTTGGGTCGGGTGATGAGGATCCGACCCGTTCGCGCAGCTCCAGAGCGCATTTCGGAGAAGGTGGAGGAGAGCATAAAGAACGCGCAGGAGGCGTGCGCCGGCGACCCGACGAGCGGCGAGTGCGTGGCGGCGTGGGACGAGGTGGAGGAGCTGAGCGCGGCGGCGAGCCACGCCAAATACAAGCAAAAGGAAAAGGACTCCGACCCGCTCGAGACCTACTGCAAGGACAATCCGGAGACCATTGAGTGCAAAACTTTCGAAGACTGA 399 0.589 MATMTGVSLSSPRVFFNASASPQNTYAVKFAVPLSQGMRLGSVRLGRVMRIRPVRAAPERISEKVEESIKNAQEACAGDPTSGECVAAWDEVEELSAAASHAKYKQKEKDSDPLETYCKDNPETIECKTFED* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1855 132 Pfam CP12 domain 61 131 - -
Gso3g1855 132 PANTHER CALVIN CYCLE PROTEIN CP12-1 1 132 - -
Gso3g1855 132 SMART CP12_2 61 132 IPR003823 -
Gso3g1855 132 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 1 132 IPR039314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1855 Gso-Chr3 44156175 44157121 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1855 - - gmx:100803973 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1820 19 46938808 46939489 Gso3g1855 3 44156175 44157121 GST
Gso3g1855 3 44156175 44157121 Gso2g0108 2 1120305 1120990 PCT
Gso3g1855 3 44156175 44157121 Gso10g0115 10 1213701 1214328 PCT
Gso2g0108 2 1120305 1120990 Gso3g1855 3 44156175 44157121 PCT
Gso10g0115 10 1213701 1214328 Gso3g1855 3 44156175 44157121 PCT