Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0115 ATGGTAACAATAGCTGGTGGTGTGAGTCTTTCAAGCCCTAGCAGGGTATTTGCTAATGCTAAGGGAATAGACTCAGCACAAAAGGCCCAGGCCGTGAGGTTTCCAGCTCTGTCGAGGCCCATTCAAAAGTGGCCTGGTTTGGTGAAGACCCGGCCCGTTCGGGCGACGCCGGAGAAGATATCGGAGAAGGTAGAGGAGAGCATAAAGAGCGCGGAGGAGGCGTGCTCGGGAGGCGGCGGTGACGCGGAATGCGCGGCGGCCTGGGACGAGGTGGAGGAGCTGAGCGCGGCGGCGAGCCACGCCAGGGAGAAGCAGAAGCAGTCTGACCCGCTCGAAAATTACTGCAAGGACAATCCAGAGACTGATGAGTGCCGCACCTATGATAATTGA 390 0.5821 MVTIAGGVSLSSPSRVFANAKGIDSAQKAQAVRFPALSRPIQKWPGLVKTRPVRATPEKISEKVEESIKSAEEACSGGGGDAECAAAWDEVEELSAAASHAREKQKQSDPLENYCKDNPETDECRTYDN* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0115 129 Pfam CP12 domain 60 128 - -
Gso10g0115 129 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 1 129 - -
Gso10g0115 129 SMART CP12_2 60 129 IPR003823 -
Gso10g0115 129 MobiDBLite consensus disorder prediction 95 129 - -
Gso10g0115 129 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 1 129 IPR039314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0115 Gso-Chr10 1213701 1214328 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0115 - - gmx:100814289 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0108 2 1120305 1120990 Gso10g0115 10 1213701 1214328 GST
Gso19g1820 19 46938808 46939489 Gso10g0115 10 1213701 1214328 PCT
Gso3g1855 3 44156175 44157121 Gso10g0115 10 1213701 1214328 PCT
Gso10g0115 10 1213701 1214328 Gso19g1820 19 46938808 46939489 PCT
Gso10g0115 10 1213701 1214328 Gso3g1855 3 44156175 44157121 PCT