Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1820 ATGTGTACAGAAATCCTCCCCAGCCACAGCTACAATCTACTCCTTAGACATCATCATAAACCCCCCTCTACAGAAACAGAAGCAGAGAAGAATCAGAGAATGGCAACTATGACTGGTGTGAGCCTTTCATGCCCCAGGGTTTTCTTCAACGCATCAGCCTCACCGCAAAACGCGCATGCTGTAAAGTTCTCACTTCCACCCAGCCAAGCAGTGCGACCGGGTAGTATCAAGTTGGGTCGCGTGATGAGGATCCGACCCGTTCGCGCTGCGCCTGAGCGCATATCGGAGAAGGTGGAGGAGAGCATAAAGAACGCGCAGGAGGCGTGCGCCGGCGATCCGACGAGCGGCGAGTGCGTGGCGGCGTGGGACGAGGTGGAGGAGCTGAGCGCGGCGGCGAGCCACGCCAGGGACAAGCAAAAGGAAAAGGACTCCGACCCGCTCGAGAATTACTGCAAGGACAACCCGGAGACCATTGAGTGCAAAACTTTCGAAGACTGA 498 0.5643 MCTEILPSHSYNLLLRHHHKPPSTETEAEKNQRMATMTGVSLSCPRVFFNASASPQNAHAVKFSLPPSQAVRPGSIKLGRVMRIRPVRAAPERISEKVEESIKNAQEACAGDPTSGECVAAWDEVEELSAAASHARDKQKEKDSDPLENYCKDNPETIECKTFED* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1820 165 PANTHER CALVIN CYCLE PROTEIN CP12-1 34 165 - -
Gso19g1820 165 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 34 165 IPR039314 -
Gso19g1820 165 MobiDBLite consensus disorder prediction 130 153 - -
Gso19g1820 165 SMART CP12_2 94 165 IPR003823 -
Gso19g1820 165 Pfam CP12 domain 94 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1820 Gso-Chr19 46938808 46939489 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1820 - - gmx:100812168 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1820 19 46938808 46939489 Gso3g1855 3 44156175 44157121 GST
Gso19g1820 19 46938808 46939489 Gso2g0108 2 1120305 1120990 PCT
Gso19g1820 19 46938808 46939489 Gso10g0115 10 1213701 1214328 PCT
Gso2g0108 2 1120305 1120990 Gso19g1820 19 46938808 46939489 PCT
Gso10g0115 10 1213701 1214328 Gso19g1820 19 46938808 46939489 PCT