Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1765 ATGCAGAAAATGGCGTACACGTTTTCGTTTCCGGAGGAGGTGCTGGAGCACGTGTTCTCGTTCATATGGAGCGAGAGGGACAGGAACGCGATCTCGCTGGTGTGCAAGTCGTGGTACGAGATCGAGAGGTGGTGCAGGAGGAAGGTTTTCGTGGGGAACTGCTACGCGGTGAGCCCTTTGATGGTGATCAAGCGCTTCCCGGAGCTGAGATCCATTGCGCTCAAAGGGAAGCCGCACTTCGCGGACTTCAATTTGGTCCCCGAGGGTTGGGGAGGTTACGTTTGCCCCTGGATCGCCGCCATGGCCCGGGCCTTCCCCTGCCTCGAAGAGATCAGGCTCAAGAGGATGGTCATCACCGACGAGAGCTTGGAGCTCATCGCTAAGTCCTTCAAGAACTTCAAGGTCTTGGTTCTCACTTCCTGTGAGGGTTTTACTGCCGATGGACTTGCCGCCATTGCTTCCAACTGCAGGAATCTAAGGGAATTGGACTTGCAGGAGAGTGAAGTGGAGGACCTTAGTGGGCACTGGCTAAGCCATTTTCCTGATTCCTACACTTCATTAGTTTCACTTAACATCTCTTGCTTAAACCATGAGGTGAGTTTATCTGCATTAGAGCGTCTGCTTGGGAGGTGTCGGAACCTGCGGACCCTCCGTCTCAATCGTGCCGTGCCCCTTGATAGACTACCCAACCTACTTCTCCGGTGTCCTCAGCTGGTTGAGTTAGGCACAGGAGTCTATTCAACTGAGATGCGACCGGAGGTCTTCTCAAACCTGGAAGCAGCATTTTCTGGTTGCAAGCAGTTGAAGAGCTTGTCTGGCTTTTGGGATGTGCTTCCATCCTACCTTCCAGCTGTCTACCCCATCTGCTCCAGGCTAACATCGCTAAACTTGAGTTATGCTATTATTCAAAGCTCTGATCTTATTAAGCTTATCAGTCAATGCCCAAATTTGTTGCGATTATGGGTGCTGGATTACATAGAAGATGCTGGTCTTTATGCCCTTGCTGCATCATGTAAGGATCTAAGGGAGTTAAGGGTGTTTCCGTCTGAGCCGTTTGGTTTAGAACCAAATGTTTCATTGACAGAACAGGGCCTTGTCTCTGTGTCTGAAGGTTGCCCCAAGCTCCAATCGGTTCTATATTTTTGTCGACAAATGTCGAATGCAGCCCTACATACAATTGCACGGAACAGGCCTAATTTGACTCGTTTTAGGCTTTGTATTATTGAGCCTCGAACTCCTGACTATCTAACCCAGGAACCCCTGGATTCTGGTTTTGGAGCTATTGTAGAGCAATGCAAGGATCTTCAACGCCTATCCCTGTCTGGTCTTCTTACTGACCGTGTTTTTGAGTATATTGGGACTTATGCGAAGAAGCTGGAGATGCTATCTGTGGCTTTTGCTGGAGATAGTGATTTGGGACTTCACCATGTGCTGTCAGGGTGTGATAATCTTAGGAAGCTGGAGATAAGGGATTGCCCCTTTGGTGACAAGGCCCTTTTGGCAAATGCTGAAAAGCTGGAGACAATGCGATCCCTTTGGATGTCCTCCTGCTCAGTGAGTTATGGAGCGTGTAAGCTACTGGGTCAGAAAATGCCCAGACTCAACGTTGAAGTCATTGATGAAAGAGGACCTCCAGATTCAAGGCCAGATGATTGTCCTGTTGAGAAGCTTTATATATACAGGACTGTTGCTGGGCCAAGGTTGGACATGCCTGGTTTTGTGTGGACAATGGAAGATGATTCTTCACTAAGGCTTGAGTGA 1761 0.4918 MQKMAYTFSFPEEVLEHVFSFIWSERDRNAISLVCKSWYEIERWCRRKVFVGNCYAVSPLMVIKRFPELRSIALKGKPHFADFNLVPEGWGGYVCPWIAAMARAFPCLEEIRLKRMVITDESLELIAKSFKNFKVLVLTSCEGFTADGLAAIASNCRNLRELDLQESEVEDLSGHWLSHFPDSYTSLVSLNISCLNHEVSLSALERLLGRCRNLRTLRLNRAVPLDRLPNLLLRCPQLVELGTGVYSTEMRPEVFSNLEAAFSGCKQLKSLSGFWDVLPSYLPAVYPICSRLTSLNLSYAIIQSSDLIKLISQCPNLLRLWVLDYIEDAGLYALAASCKDLRELRVFPSEPFGLEPNVSLTEQGLVSVSEGCPKLQSVLYFCRQMSNAALHTIARNRPNLTRFRLCIIEPRTPDYLTQEPLDSGFGAIVEQCKDLQRLSLSGLLTDRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVLSGCDNLRKLEIRDCPFGDKALLANAEKLETMRSLWMSSCSVSYGACKLLGQKMPRLNVEVIDERGPPDSRPDDCPVEKLYIYRTVAGPRLDMPGFVWTMEDDSSLRLE* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1765 586 PANTHER PROTEIN TRANSPORT INHIBITOR RESPONSE 1 8 578 - -
Gso3g1765 586 SUPERFAMILY RNI-like 92 538 - -
Gso3g1765 586 Gene3D - 2 46 - -
Gso3g1765 586 SUPERFAMILY F-box domain 6 42 IPR036047 GO:0005515
Gso3g1765 586 Gene3D Ribonuclease Inhibitor 47 577 IPR032675 -
Gso3g1765 586 Pfam Transport inhibitor response 1 protein domain 67 113 IPR041101 -
Gso3g1765 586 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 8 578 - -
Gso3g1765 586 SMART LRR_CC_2 372 396 IPR006553 -
Gso3g1765 586 SMART LRR_CC_2 130 155 IPR006553 -
Gso3g1765 586 SMART LRR_CC_2 432 455 IPR006553 -
Gso3g1765 586 SMART LRR_CC_2 314 337 IPR006553 -
Gso3g1765 586 SMART LRR_CC_2 105 129 IPR006553 -
Gso3g1765 586 SMART LRR_CC_2 481 505 IPR006553 -
Gso3g1765 586 SMART LRR_CC_2 289 313 IPR006553 -
Gso3g1765 586 SMART fbox_2 10 51 IPR001810 GO:0005515
Gso3g1765 586 Pfam F-box 8 48 IPR041567 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1765 Gso-Chr3 43469335 43473193 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1765 K14485 - gmx:100816241 1168.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1733 19 46228366 46232206 Gso3g1765 3 43469335 43473193 GST
Gso3g1765 3 43469335 43473193 Gso2g1268 2 15708811 15711776 PCT
Gso3g1765 3 43469335 43473193 Gso10g0187 10 1954185 1957101 PCT
Gso2g1268 2 15708811 15711776 Gso3g1765 3 43469335 43473193 PCT
Gso10g0187 10 1954185 1957101 Gso3g1765 3 43469335 43473193 PCT