Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1738 ATGATGCCGAAACAACCGATGAACGTTTTGACCACAAAACCTTCACCTTTGAGCACCATGGTGGTGATGCTGATCCTCTGCATTCTGGGTTTCTACGCTCTGCATTTCCCTCACTCTTCCACACCTTCCGAAAACCTCTCTCACTTGGAAAAACTTTTTCTTTCCACTTCCTCAAACTCTACTATTTCGTCCTACCTCCGCGCTCTTACCATGCACCCTCACCTCGCCGGAACAAAACCCGCTTCCGACACAACCCGCTACGTGCTTAACCACTTCACTTCATTGGGCCTCTCGGCCCATACAACAACCTACACCACTCTCCTCTCCTTCCCCGTGCGCTCCTCCCTCTCGGCGCATTTTAACGACGGTTCTTCGGTGAGCCTGCGGCTCACCGAAGAAGCGTCGGGGGCGGGGGTGGTGGCAGCGTACCACGCGTACTCGCCGTCGGGCGCGGTGCACGCGCCGGCGGTGTTCGCGAACTACGGGAGGCAGAGGGACTACCGCGCGCTGGCGGCGATGGGGGTGAACGTGAGCGGCTGCGTGGTGGTGGTGCGTAAGGGCGGGGAGATGGGGCGGGGCGCGGTGGTGGAGAGGGCGGAGGTGAACGGCGCGGCGGCAGTGCTCGTTTACGGCGAGGGTGACACGTGGCGGAAGGGGTTTGAGAGGGGACACGTGATGAGAGGGGGGATAGGAGACCCACTTACTCCCGGGTGGGCTGGGGTTGAAGGGGCTGAGACGCTGGGGTTGGAAGATAGGGAGGTTTTGAAGAGGTTTCCCAAAATTCCATCTATGCCCTTGTCAGCTGAGGTGGCTGATACTATTTTGTCCTCTCTTGGGGGTGTTCATGTGCCCCTTCATTGGAGGGGTACCCTTAGGTCTAAGGTCAGGCATGTTGGTCCTGGCCCCACCTTGCTCAATTTCACTTATGAGGGTGAAAAGAAGGTGGCCACCATTCAAAATGTTTTTGCTGTCATAAAGGGATCGGAAGAACCGGATCGATATGTTCTGCTTGGGAACCATAGAGATGCATGGACGTATGGTGCTGTTGATCCCAGCAGTGGAACAGCTGCACTACTCGATATTGCTCGTCGATTTTCTGCTCTACTGGGCTTGGGGTGGAAGCCAAGGAGGACAATCATTCTCTGCAGTTGGGATGCAGAGGAATTTGGGATGATAGGATCCACTGAGTGGGTTGAACAAAACCTTATTAATCTAGGTTCCAAAGCTGTAGCATACCTTAATGTGGACTGTGCTGTGCAAGGTCCTGATTTCTTTGTTGGTTCAACTCCTCAGCTAGACAATCTTATTCTTGAGGTCACAAACAAGGTCAAAGATCCTGACTCTGATGGTGTGTCATTGTATGAGAATTGGGCTGCTGGTGGTGGAGGCAATAATATTCAGAGGCTCAGTGGAGTTGATTCTGATTTCGCTCCATTTGTGCAACACGCAGGGGTTCCATCCATTGATATGTATTATGGAAGAGATTTTCCCGTCTATCACACTGCGTTCGACTCCTATAACTGGATGGCAGAGTATGGCGATCCATTCTTCCACCGCCATGTTGCTGTTACTGGAGTTTGGGGGCTTCTAGCTCTTCACTTGGCTAATGATCCCATTCTTCCTTTCAATTACGTTTCATATGCAAATGAGTTACAGTTGTACAAAAACACGTTGAGCAACTTGATAGACCAGAAAATTTCTCTACATCCATTAACCCTTTCAATTGAAGAATTTGCTTCTGCTGCCAAGGAAGCTGATGATGAAATAAAGAAACTGAGATTGCAAGAAACTGAAGGTTGTTTTGTAGATATGAAAAAGCGAGCATTGAATGATAGACTAATGCTTGCAGAAAAAGGCTTCCTGGATGCAGATGGACTTCAGGGAAAGCAATGGTTTAAGCATCTTGTGTTTGGGCCTTCCAGCGACCATGAAAGGATCAATTTCTTCCCAGGGATTTCTGATTCTACCATTACGTCAGCAGGTGTAAGTGAAAGAGAAAGGCTAGCATCAATTCAACACGAAATCTGGAGGGTTGCCAGAGCCATTCGAAGAGCTGCTTCTGCACTCAGAGGAGAATTCACCTAA 2085 0.5046 MMPKQPMNVLTTKPSPLSTMVVMLILCILGFYALHFPHSSTPSENLSHLEKLFLSTSSNSTISSYLRALTMHPHLAGTKPASDTTRYVLNHFTSLGLSAHTTTYTTLLSFPVRSSLSAHFNDGSSVSLRLTEEASGAGVVAAYHAYSPSGAVHAPAVFANYGRQRDYRALAAMGVNVSGCVVVVRKGGEMGRGAVVERAEVNGAAAVLVYGEGDTWRKGFERGHVMRGGIGDPLTPGWAGVEGAETLGLEDREVLKRFPKIPSMPLSAEVADTILSSLGGVHVPLHWRGTLRSKVRHVGPGPTLLNFTYEGEKKVATIQNVFAVIKGSEEPDRYVLLGNHRDAWTYGAVDPSSGTAALLDIARRFSALLGLGWKPRRTIILCSWDAEEFGMIGSTEWVEQNLINLGSKAVAYLNVDCAVQGPDFFVGSTPQLDNLILEVTNKVKDPDSDGVSLYENWAAGGGGNNIQRLSGVDSDFAPFVQHAGVPSIDMYYGRDFPVYHTAFDSYNWMAEYGDPFFHRHVAVTGVWGLLALHLANDPILPFNYVSYANELQLYKNTLSNLIDQKISLHPLTLSIEEFASAAKEADDEIKKLRLQETEGCFVDMKKRALNDRLMLAEKGFLDADGLQGKQWFKHLVFGPSSDHERINFFPGISDSTITSAGVSERERLASIQHEIWRVARAIRRAASALRGEFT* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1738 694 Gene3D - 114 311 - -
Gso3g1738 694 CDD M28_PSMA_like 316 542 - -
Gso3g1738 694 SUPERFAMILY Zn-dependent exopeptidases 58 540 - -
Gso3g1738 694 Gene3D - 544 694 IPR036757 -
Gso3g1738 694 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 33 694 IPR039373 -
Gso3g1738 694 SUPERFAMILY Transferrin receptor-like dimerisation domain 541 692 IPR036757 -
Gso3g1738 694 Pfam Peptidase family M28 320 507 IPR007484 -
Gso3g1738 694 SUPERFAMILY PA domain 107 322 IPR046450 -
Gso3g1738 694 PANTHER F10A2.10 PROTEIN-RELATED 33 694 - -
Gso3g1738 694 Coils Coil 575 595 - -
Gso3g1738 694 Pfam Transferrin receptor-like dimerisation domain 566 689 IPR007365 -
Gso3g1738 694 Gene3D Zn peptidases 60 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1738 Gso-Chr3 43224558 43230764 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1738 K01301 - gmx:100818733 1374.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1738 3 43224558 43230764 Gso3g1738 3 43224558 43230764 ECH
Gso19g1707 19 45984177 45989734 Gso3g1738 3 43224558 43230764 GST
Gso3g1738 3 43224558 43230764 Gso10g0799 10 11532633 11539153 PCT
Gso10g0799 10 11532633 11539153 Gso3g1738 3 43224558 43230764 PCT