Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0799 ATGGTTCCGTCAAATACCGTAACGGCATTCACCGCAAAGCCGTCTCCGTTATTAACTTTCGTAATGCTCATCGTCCTCGGCGTGGTGGGATTCTATTCCCTGCATTTCCCTCCCCGTCCCACCACCTCCCCCGACCCCTCGCGCTTCCGCCACGTGTTCGTATCGTCTTCGTCGAACTCCACTGTCGCGAGCTACCTCCGCGCCCTCACCGTGCACCCTCACCTCTCTGGAACAAAACCCGCCTCGTTAACCGCACGCTATGTGGTGAACCATTTCACCACCCTCGGCCTTCAAACAAAAACAGTACAACACTCTGCGCTGCTATCCTACCCGGTGCGCTCCTCGCTCGCCGCGCATTTTAGCGACGGCACGAGTTTCGAGTTTCAGTTAACCGAACCGGACACTGAGAAGGAAGTGGTGGCGCCGTACCACGCATACTCGCCGTCAGGTGCGGCGGAGGCGGCCGCGGTGTTTGTGAACTACGGGCGGGAGGAGGACTACCGTCAGCTGGTGGCTGCGGGGGTGGAGGTGGCGGGGTGCGTGGTGGTGGCGAGAGGCGGCGCACTGCCGCGCGGGGCGGTGGTGGAGGCGGCGGAGAGGCACGGTGCGGCGGCGGCGGCGGTGTTCGTGGAGAGGGACACGTGGCGCGAGGGGTTTGAGAGAGGGCACGTGATGAGAGGGGGGATAGGGGACCCACTGAGTCCTGGGTGGAGTGGGGTGGAAGGTGGTGAGAGTTTGGGTTTGGAAGATAGTGAGGTTTTGAAAAGGTTTCCGAAAATTCCATCTTTGCCCTTGTCTGCTGAGGCTGCGGAGAGGATCTTGGAGTCGCTTGGTGGTGCTCCTCTGCCCTTGGATTGGAGGGGTACCCTCAAGTCATCCAAGGTTAAGAATGTTGGCCCGGGCCCCACCATCCTCAACTTTACTTATCAGGGTGAATTGAAGGTGGCTACCATTGAAAACGTTTTTGCCATTATCAAGGGACGGGAAGAACCTGATCGATATGTTCTGCTTGGGAACCATAGAGATGCATGGACATATGGTGCTGTTGACCCCAACAGTGGGACAGCTGCTCTACTTGACATTGCTGGCAGATTTTCTATTCTATTGCGTTTGGGGTGGACTCCACGGAGGACCATCATTCTATGCAGTTGGGATGCAGAGGAATTTGGAATGATAGGATCCACTGAGTGGGTTGAACAAAACCTTGTCAATCTTCGTTCCAAAGCTGTAGCATACCTCAATGTAGACTGTGCTGTTCAAGGGCCTGGTTTCTTTGCTGGCTCAACTCCTCAGCTAGATGATCTTCTTGTCGAGGTCATAAAACAGGTCAAGGATCCTGACACTGAAGGTACTACAATATATGAGAATTGGGCAGCTGCTGGTGGAAACTCTAATATTCAAAGGCTCAGTGGTGTTGATTCTGATTTCGCTCCATTTGTGCAACATGCAGGGGTTCCATCTGTTGATGTATATTATGGAAAAGATTATCCTGTCTATCACACTGCTTTCGATTCCTATAACTGGATGACAAAGTTTGGAGATCCATTCTTTCAGCGCCATGAAGCTGTTACTGGAATTTGGGGGCTTCTAGCCCTTCGCCTTGCTGATGATTCCATTATACCTTTCAATTATCTTTCTTATGCGAATCAGTTACAGGTCTACAATAACATATTGAGCAACTTGTTAGACAAGCAGATTACTCTACATCCACTAAATACTTCGATTCAAGAATTTGCTTCTGCTGCCAAAGAAGCTAATGATGAATCAAAGAAATTAAAATGGCAAGAAGCTTCAGATCGTTCTATAGATATGAAAATGCGAGCATTGAATGATAGACTAATGCTTGCGGAAAGAGGCTTCTTGGACGTTGATGGGCTTCAAGGAAGGCAATGGTTCAAGCATCTTGTTTTTGGGCCTCCCAGCGACCATGAAAGCAAGTTGGATTTCTTCCCTGGAATCGCTGACTCTCTGTCTAGGATGGATAAAATGAGTGAAAAAGAAAGGCTTGCTGCAATTCAGCATGAGATCTGGAGGGTTGCCAGGGCCATTCAAAGAGCTGCTTCAGCACTAAGAGGGGATTTGGCTTAA 2088 0.5096 MVPSNTVTAFTAKPSPLLTFVMLIVLGVVGFYSLHFPPRPTTSPDPSRFRHVFVSSSSNSTVASYLRALTVHPHLSGTKPASLTARYVVNHFTTLGLQTKTVQHSALLSYPVRSSLAAHFSDGTSFEFQLTEPDTEKEVVAPYHAYSPSGAAEAAAVFVNYGREEDYRQLVAAGVEVAGCVVVARGGALPRGAVVEAAERHGAAAAAVFVERDTWREGFERGHVMRGGIGDPLSPGWSGVEGGESLGLEDSEVLKRFPKIPSLPLSAEAAERILESLGGAPLPLDWRGTLKSSKVKNVGPGPTILNFTYQGELKVATIENVFAIIKGREEPDRYVLLGNHRDAWTYGAVDPNSGTAALLDIAGRFSILLRLGWTPRRTIILCSWDAEEFGMIGSTEWVEQNLVNLRSKAVAYLNVDCAVQGPGFFAGSTPQLDDLLVEVIKQVKDPDTEGTTIYENWAAAGGNSNIQRLSGVDSDFAPFVQHAGVPSVDVYYGKDYPVYHTAFDSYNWMTKFGDPFFQRHEAVTGIWGLLALRLADDSIIPFNYLSYANQLQVYNNILSNLLDKQITLHPLNTSIQEFASAAKEANDESKKLKWQEASDRSIDMKMRALNDRLMLAERGFLDVDGLQGRQWFKHLVFGPPSDHESKLDFFPGIADSLSRMDKMSEKERLAAIQHEIWRVARAIQRAASALRGDLA* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0799 695 SUPERFAMILY Transferrin receptor-like dimerisation domain 541 692 IPR036757 -
Gso10g0799 695 CDD M28_PSMA_like 316 542 - -
Gso10g0799 695 Gene3D Zn peptidases 61 541 - -
Gso10g0799 695 Pfam Transferrin receptor-like dimerisation domain 566 690 IPR007365 -
Gso10g0799 695 PANTHER F10A2.10 PROTEIN-RELATED 35 694 - -
Gso10g0799 695 Pfam Peptidase family M28 320 507 IPR007484 -
Gso10g0799 695 Gene3D - 114 311 - -
Gso10g0799 695 Gene3D - 544 695 IPR036757 -
Gso10g0799 695 SUPERFAMILY Zn-dependent exopeptidases 61 538 - -
Gso10g0799 695 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 35 694 IPR039373 -
Gso10g0799 695 SUPERFAMILY PA domain 107 322 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0799 Gso-Chr10 11532633 11539153 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0799 K01301 - gmx:100817485 1307.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1707 19 45984177 45989734 Gso10g0799 10 11532633 11539153 PCT
Gso3g1738 3 43224558 43230764 Gso10g0799 10 11532633 11539153 PCT
Gso10g0799 10 11532633 11539153 Gso19g1707 19 45984177 45989734 PCT
Gso10g0799 10 11532633 11539153 Gso3g1738 3 43224558 43230764 PCT