Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1698 ATGTCGGTAAAGGAGTGTCACCACCACAAGGGAAAGAAGCACAAACTCTGGAGACGCATCTTCTGGGGCATAGTGATCTTCGCCTTCATCGTGTTGCTAACAGTTCTTATAATCTGGGCAATCCTAAAGCCTTCAAAGCCAACCTTCATCCTCCAAGACGTGACCGTCTACGGCTTCAACGCCACCATCCCCAACTTCCTCACCTCAAGCTTTCAGGTCACGCTTTCCTCGCGCAACCCCAACGACAAAATCGGAGTCTACTACGACCGTCTCGACACCTACGTCACTTACCGGAACCAGCAGGTCACGTACCGAACCTCAATCCCACCCTCATACCAAGGTCACAAGGAAGAGGATGTGTGGTCCCCATTCGTCTACGGCACTAACGTCCCCGTCGCACCCTTCAACTTCGTTGGTCTCAGTCAAGACCAGACCAACGGCAACGTCCTCGTCCTCGTTAAGATTGACGGTAAGGTACGATGGAAAGTTGGTACCTTCGTCTCTGGTCACTACAACCTCTATGTAAGGTGCCCTGCTTTCATAACTTTTGGCCCCCAAAGCACCGGGATTGCCCTTGGCAAGAACGCCGTTAAGTATCAATTGGTTCAACGCTGCACCGTCGGGGTTTGA 630 0.5206 MSVKECHHHKGKKHKLWRRIFWGIVIFAFIVLLTVLIIWAILKPSKPTFILQDVTVYGFNATIPNFLTSSFQVTLSSRNPNDKIGVYYDRLDTYVTYRNQQVTYRTSIPPSYQGHKEEDVWSPFVYGTNVPVAPFNFVGLSQDQTNGNVLVLVKIDGKVRWKVGTFVSGHYNLYVRCPAFITFGPQSTGIALGKNAVKYQLVQRCTVGV* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1698 209 Pfam Late embryogenesis abundant protein 74 176 IPR004864 -
Gso3g1698 209 PANTHER OS05G0367900 PROTEIN 4 209 IPR044839 GO:0098542
Gso3g1698 209 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 4 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1698 Gso-Chr3 42820790 42821891 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1698 - - gmx:100795832 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1698 3 42820790 42821891 Gso3g1698 3 42820790 42821891 ECH
Gso19g1667 19 45574862 45575878 Gso3g1698 3 42820790 42821891 GST
Gso3g1698 3 42820790 42821891 Gso2g1676 2 39788229 39789717 PCT
Gso3g1698 3 42820790 42821891 Gso10g0695 10 9291386 9292925 PCT
Gso2g1676 2 39788229 39789717 Gso3g1698 3 42820790 42821891 PCT
Gso10g0695 10 9291386 9292925 Gso3g1698 3 42820790 42821891 PCT