Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1667 ATGTCGGTTAAGGAGTGCCACCACCACCACAAGGGAAAGAAGCACAAGCTCTGGAGACGCATCTTCTGGGGAATAGTGATCTTCGCCTTCATCGTGTTACTGACAGTTCTTATAATCTGGGCAATCCTAAAGCCTTCAAAACCAACCTTCATCCTCCAAGACGTCACCGTTTACGGCTTCAATGCCACCATCCCCAACTTCCTCACCTCAAGTTTTCAGGTCACGCTTTCCTCGCGCAACCCCAACGACAAAATCGGAATCTACTACGACCGTCTCAACACCTACGTAACTTACCGGAACCAGCAGGTCACGTACCGAACCTCAATCCCACCCTCGTACCAAGGTCACAAGGAAGAGGATGTGTGGTCCCCGTTTGTCTACGGCACTAATGTCCCCGTCGCACCCTACAACTTCGTTGGCCTCAGTCAAGACCAGACCAACGGCAACGTCCTCGTCCTCGTTAAGATTGACGGTAAGGTACGATGGAAAGTTGGTTCCTTCGTCTCTGCTCACTACAACCTCAATGTAAGGTGCCCTGCTTTCATAACCTTTGGCCCCCAAAGCAACGGGATTGCCCTTGGCAATAACGCCGTTAAGTATCAATTGGTTCAACGCTGCACCGTCGGGGTTTGA 633 0.5118 MSVKECHHHHKGKKHKLWRRIFWGIVIFAFIVLLTVLIIWAILKPSKPTFILQDVTVYGFNATIPNFLTSSFQVTLSSRNPNDKIGIYYDRLNTYVTYRNQQVTYRTSIPPSYQGHKEEDVWSPFVYGTNVPVAPYNFVGLSQDQTNGNVLVLVKIDGKVRWKVGSFVSAHYNLNVRCPAFITFGPQSNGIALGNNAVKYQLVQRCTVGV* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1667 210 PANTHER OS05G0367900 PROTEIN 8 210 IPR044839 GO:0098542
Gso19g1667 210 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 8 210 - -
Gso19g1667 210 Pfam Late embryogenesis abundant protein 75 178 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1667 Gso-Chr19 45574862 45575878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1667 7 178 EF-hand Containing Proteins AT5G21130 21.667 2.32e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1667 - - gmx:100500476 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1667 19 45574862 45575878 Gso3g1698 3 42820790 42821891 GST
Gso19g1667 19 45574862 45575878 Gso2g1676 2 39788229 39789717 PCT
Gso19g1667 19 45574862 45575878 Gso10g0695 10 9291386 9292925 PCT
Gso2g1676 2 39788229 39789717 Gso19g1667 19 45574862 45575878 PCT
Gso10g0695 10 9291386 9292925 Gso19g1667 19 45574862 45575878 PCT