Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1676 ATGTCGGAGTGCGAGCACCACAAGGGGAAGAAGAGGAAGATCTTCCGGCAAGTGTTCTGGTGCATAGTGGTGTTCCTCTTCCTCGTGCTGCTCACAATTCTTTTGATATGGGCAATCCTTAGACCCACCAAACCCACCTTCACCCTCCAAGACGTCACGGTCTACGCCTTCAACGCCACCATACCGAACTTCCTCACTTCGAATTTTCAGGTCACGCTCATCTCGCGCAACCCGAACGACAACATCGGTGTTTACTACGACCGCCTCGAAATCTACGTGATCTACCGGAGCCAGCAGATCACGTACCGAACCGCCATCCCTCCGACCTACCAGGGCCACAATGAGATCAATGTTTGGTCTCCGTTTGTTTATGGTACCAACATCCCCGTCGCGCCGTTCAATTTCCTCCGCCTCAGCCAGGACCAGAGTGACGGTAATGTCCTCGTCACCATCCGAGCCGACGGAAGGGTTCGTTGGAAGGTCGGCGCCTTCATCTCCGGTCGCTACCACTTCTACGTCCGCTGCCCTGCCTTCATCTCCTTTGGCCCCCGCAGCAATGGAATCGTCGTCGGAGAAAACGCCATCAAGTTCCAGATAATCCAGCGGTGCTCCGTTAGTGTCTAA 624 0.5481 MSECEHHKGKKRKIFRQVFWCIVVFLFLVLLTILLIWAILRPTKPTFTLQDVTVYAFNATIPNFLTSNFQVTLISRNPNDNIGVYYDRLEIYVIYRSQQITYRTAIPPTYQGHNEINVWSPFVYGTNIPVAPFNFLRLSQDQSDGNVLVTIRADGRVRWKVGAFISGRYHFYVRCPAFISFGPRSNGIVVGENAIKFQIIQRCSVSV* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1676 207 Pfam Late embryogenesis abundant protein 75 175 IPR004864 -
Gso2g1676 207 PANTHER OS05G0367900 PROTEIN 6 207 IPR044839 GO:0098542
Gso2g1676 207 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 6 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1676 Gso-Chr2 39788229 39789717 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1676 - - gmx:100813741 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1676 2 39788229 39789717 Gso10g0695 10 9291386 9292925 GST
Gso19g1667 19 45574862 45575878 Gso2g1676 2 39788229 39789717 PCT
Gso3g1698 3 42820790 42821891 Gso2g1676 2 39788229 39789717 PCT
Gso2g1676 2 39788229 39789717 Gso19g1667 19 45574862 45575878 PCT
Gso2g1676 2 39788229 39789717 Gso3g1698 3 42820790 42821891 PCT