Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1682 ATGCGTTTGGTCCTCATAGAAGAAGCGTCGACCGACGACCGAGACCGAGAGAACATGTGTGATTACGGTAATACCCTTCCCTATTACAGCAAATCGCTGTTGTGCCATTTTCTTTTTCTTGGTTATTCCAACATTAATTTTTGCAAACACACAGCGATTCCCCTCTTTCTGAGATATTTCGAATTTCGATACTTTGATCAGATCCACAACACTCCTTCATCCATGACGCTTGGCTCTTCAGGATCCAGTGTCGTGGTTCCAAGGAACTTCAGATTGCTGGAGGAGCTTGAGAAGGGAGAAAAAGGAATCGGAGATGGAACAGTTAGCTATGGAATGGATGATGGTGACGACATTTACATGCGCTCTTGGACTGGAACCATTATTGGCCCCTATAATACTGTACATGAAGGAAGAATTTATCAATTGAAGTTGTTTTGTGATAAAGACTACCCAGAAAAGCCCCCAAGTGTTCGGTTTCATTCACGAATCAATATGACTTGTGTTAATCATGAAACTGGAGTGGTTGAATCAAAGAAATTTGGTCTTCTTGCAAATTGGCAACGGAGGTTTACCATGGAAGATATACTGACCCAGCTGAAGAAGGAAATGGCGGCTTCACATAACCGCAAGCTTGTCCAACCTCCTGAAGGTACTCACTATTAG 663 0.4284 MRLVLIEEASTDDRDRENMCDYGNTLPYYSKSLLCHFLFLGYSNINFCKHTAIPLFLRYFEFRYFDQIHNTPSSMTLGSSGSSVVVPRNFRLLEELEKGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPYNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVESKKFGLLANWQRRFTMEDILTQLKKEMAASHNRKLVQPPEGTHY* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1682 220 SUPERFAMILY UBC-like 85 220 IPR016135 -
Gso3g1682 220 Pfam Ubiquitin-conjugating enzyme 117 206 IPR000608 -
Gso3g1682 220 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 87 220 IPR000608 -
Gso3g1682 220 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 83 214 - -
Gso3g1682 220 SMART ubc_7 90 220 - -
Gso3g1682 220 PANTHER - 83 214 - -
Gso3g1682 220 Gene3D Ubiquitin Conjugating Enzyme 73 220 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1682 Gso-Chr3 42708000 42712423 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1682 K10704 - gmx:100789495 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1653 19 45463474 45467595 Gso3g1682 3 42708000 42712423 GST
Gso3g1682 3 42708000 42712423 Gso2g1700 2 40404741 40407925 PCT
Gso3g1682 3 42708000 42712423 Gso10g0669 10 8594815 8597930 PCT
Gso2g1700 2 40404741 40407925 Gso3g1682 3 42708000 42712423 PCT
Gso10g0669 10 8594815 8597930 Gso3g1682 3 42708000 42712423 PCT