Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0669 ATGACGCTTGGCTTAGGAGGATCCAGTGTCGTGGTTCCTAGGAACTTCAGATTGCTGGAGGAGCTTGAACGCGGAGAAAAAGGAATTGGAGATGGCACAGTTAGCTATGGAATGGATGATGGTGATGACATTTACATGCGCTCTTGGACTGGCACCATTATTGGCCCCCATAATACTGTACATGAAGGAAGAATTTATCAATTGAAGCTGTTTTGTGATAAAGACTACCCAGAAAAGCCCCCAAGTGTTCGGTTTCATTCACGAATCAACATGACTTGTGTTAATCATGAAACTGGAGTGGTTGAACCAAAGAAATTTGGTCTTCTTGCAAATTGGCAAAGAGAGTACACCATGGAGGACATACTGACCCAGCTGAAGAAGGAAATGGCTGCTCCTCATAACCGGAAGCTTGTCCAGCCTCCGGAAGGTACCTACTTTTAG 441 0.449 MTLGLGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0669 146 PANTHER - 9 140 - -
Gso10g0669 146 SMART ubc_7 16 144 - -
Gso10g0669 146 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 13 146 IPR000608 -
Gso10g0669 146 SUPERFAMILY UBC-like 11 146 IPR016135 -
Gso10g0669 146 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 9 140 - -
Gso10g0669 146 Pfam Ubiquitin-conjugating enzyme 43 136 IPR000608 -
Gso10g0669 146 Gene3D Ubiquitin Conjugating Enzyme 5 146 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0669 Gso-Chr10 8594815 8597930 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0669 K10704 - gmx:100805567 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1700 2 40404741 40407925 Gso10g0669 10 8594815 8597930 GST
Gso19g1653 19 45463474 45467595 Gso10g0669 10 8594815 8597930 PCT
Gso3g1682 3 42708000 42712423 Gso10g0669 10 8594815 8597930 PCT
Gso10g0669 10 8594815 8597930 Gso19g1653 19 45463474 45467595 PCT
Gso10g0669 10 8594815 8597930 Gso3g1682 3 42708000 42712423 PCT