Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1653 ATGACGCTTGGTTCTTCAGGATCCAGTGTCGTGGTTCCAAGGAACTTCAGATTGCTGGAGGAGCTTGAGAAGGGAGAAAAAGGAATAGGAGATGGCACAGTTAGTTATGGAATGGATGATGGTGATGACATTTACATGCGCTCTTGGACTGGAACCATTATTGGTCCCTATAATACTGTACATGAAGGAAGAATTTATCAATTGAAGCTGTTTTGTGATAAAGACTACCCTGAAAAGCCCCCGAGCGTCCGGTTTCATTCACGGATCAATATGACTTGTGTTAATCATGAAACTGGAGTGGTTGAATCAAAGAAATTTGGTCTTCTTGCAAATTGGCAACAGAGGTTTACCATGGAAGATATACTGACCCAGCTGAAGAAGGAAATGGCGGCTTCACATAACCGCAAGCTTGTCCAACCTCCTGAAGGTACTCACTATTAG 441 0.4308 MTLGSSGSSVVVPRNFRLLEELEKGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPYNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVESKKFGLLANWQQRFTMEDILTQLKKEMAASHNRKLVQPPEGTHY* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1653 146 Pfam Ubiquitin-conjugating enzyme 43 132 IPR000608 -
Gso19g1653 146 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 13 146 IPR000608 -
Gso19g1653 146 Gene3D Ubiquitin Conjugating Enzyme 3 146 IPR016135 -
Gso19g1653 146 PANTHER - 9 140 - -
Gso19g1653 146 SMART ubc_7 16 146 - -
Gso19g1653 146 SUPERFAMILY UBC-like 11 146 IPR016135 -
Gso19g1653 146 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 9 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1653 Gso-Chr19 45463474 45467595 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1653 K10704 - gmx:100306398 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1653 19 45463474 45467595 Gso3g1682 3 42708000 42712423 GST
Gso19g1653 19 45463474 45467595 Gso2g1700 2 40404741 40407925 PCT
Gso19g1653 19 45463474 45467595 Gso10g0669 10 8594815 8597930 PCT
Gso2g1700 2 40404741 40407925 Gso19g1653 19 45463474 45467595 PCT
Gso10g0669 10 8594815 8597930 Gso19g1653 19 45463474 45467595 PCT