Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1670 ATGTCTTGCACTGATAAAACGGCCACCGTCACCGACGAAGCTAGCGGCGGCGGAGCCACCACAATCTTCGCCGTGCACCCCGACATAATCCAAACCCACATCCTCACGTGCCTGGACGGCCGCGCACTCGCCTCCGTCGCCAGCACGTGCTCTCAACTCCACGCGCTCTCAGACCACGAGCCTCTCTGGGAGAACATTTGCCACTCCACGTGGCCCTCCACGAACTCGCCACGCGTCCGCCACGTCATATCCACGTTCCCATGCGCGTCTCGCTCCTTTTTCTCCGACTCGTTTCCTTCCTTCGCCGCGCGCGAAGGTTCGAACATCGATCGCGCGCCGGAGCTGATTTCCGCGGTGGACATCTTCCACCGGCGGCGGGTGGTGCTGTCGAGAGTGGTGGAGACGGAGACGGAGTCCGGCTGGTTCCGGTGCTCGCCGTTTAGAATCGATGTTCTTGATCAGAAGGAGGCGGTGGCGACGGCGATGGAGTATCCACTGAGCGATGGAGCATGTGAGATTCTCGGTGAGGATTTGAGGTTGAGTTGGATAGTGGTGAATCCGAAGGGAAAGCGTGCGGTGAATGTGTCAAGTGGAACGGCGGTGTCGATGGAGCGGCACTGGCTGAGCGGGGAGGTGAAGGTGCGGTTCGCGACGGTGGTGGACGGCGGTGAGAGGGGGACGCCGGCGGAGGTGGCGCTGTGCAGCGTGACTGTGACATTCGGGAATGAGATGCAGGTGAGGGAAGCGTGTCTACAGATGGAGGACATGGATGGAATGTTCCTGAATGGTAGGGAGAGTTTGGGGATTTTGAAGCGGGCGTTGGAGGGTAAAAGGGGAACATTACTGAAGGACGGAAAGGAAGAAGGAAGGAGTAGATACTTGGAATTCATGAACAGAAAGATGGAGAGAAAAGAAAAGAAACAAAGAGATGAGAGGAGGTTGGATATGCTCTGCTTGGCTCTCGCGGTTTTGTCCTTTGCGGCTTTTTCAACACTCTTTCTCTTCTGA 1008 0.5744 MSCTDKTATVTDEASGGGATTIFAVHPDIIQTHILTCLDGRALASVASTCSQLHALSDHEPLWENICHSTWPSTNSPRVRHVISTFPCASRSFFSDSFPSFAAREGSNIDRAPELISAVDIFHRRRVVLSRVVETETESGWFRCSPFRIDVLDQKEAVATAMEYPLSDGACEILGEDLRLSWIVVNPKGKRAVNVSSGTAVSMERHWLSGEVKVRFATVVDGGERGTPAEVALCSVTVTFGNEMQVREACLQMEDMDGMFLNGRESLGILKRALEGKRGTLLKDGKEEGRSRYLEFMNRKMERKEKKQRDERRLDMLCLALAVLSFAAFSTLFLF* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1670 335 Gene3D - 11 97 - -
Gso3g1670 335 PANTHER F-BOX PROTEIN-RELATED 11 329 IPR045283 -
Gso3g1670 335 PANTHER OS12G0156500 PROTEIN 11 329 - -
Gso3g1670 335 SUPERFAMILY F-box domain 27 87 IPR036047 GO:0005515
Gso3g1670 335 Coils Coil 294 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1670 Gso-Chr3 42585436 42586443 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1670 - - gmx:100801673 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1670 3 42585436 42586443 Gso3g1670 3 42585436 42586443 ECH
Gso19g1642 19 45337202 45340128 Gso3g1670 3 42585436 42586443 GST
Gso2g0098 2 1055894 1057678 Gso3g1670 3 42585436 42586443 PCT
Gso10g0102 10 1114342 1116077 Gso3g1670 3 42585436 42586443 PCT