Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1577 ATGGAATTAGTCGTCCGGTTCAATTCAGAACTCTCAAACCGGTTTCTTCAAAACTTGCTGCTCCTGCCCCACTTTTCCTTCTTCCCTTCACTATATATACATCAAAATTTTGATAACAATAACACTTCATATTCATGCTTATTTTCAGTTTCTCTCCTTCTAACCCTCATTATATACTACCTATTTCTCAACCAAGAGCCTATTTATAGATCTCCTGCAATGGCACTAAATGAGCAAAAGGGCAAGGATGATATCCCAGAAAGTCAATATCAGAAAGGAGTGAAGCAGTTGTGTGAGAAAGGTCATCTTAATGCAGTACCTAAAAATTACATACTTCCTGTTTCCGAAAGACCCACCAAGAGTAGTGTGGAAGATACAAATGTTGTGAAGCAAAATCTTCAGTTACCCATCATTGATTTTGCCGAATTGCTTGGTCCAAATAGGCCCCAAGTCCTTCAATCCCTAGCCAATGCTTGTCAACAGTATGGATTTTTCCAGCTGGTAAATCATTGCATGTTGGAGGATGTTGTGAGGAGCATGATAGATGTGAGTGGTAGGTTCTTCGATCTCCCTTTAGAGGAGAGAGCTAAGTACATGACAACTGATATGCGAGCACCGGTTCGATGTGGGACCAGCTTCAGCCAAACCAAAGACACTGTGTTGTGTTGGAGGGATTTCTTGAAACTTCTGTGCCATCCCTTACCAGATTTCCTCCCCCATTGGCCTGCTTCACCAGTGGACTTTCGGAAAGTGGTGGGCACCTACGCAGAAGAAACCAAACATTTGTTCCTGGTGGTAATGGATGCCATCCTAGAGAGCTTAGGAATCATGGAAGACAATATTCTGAAAGACTTTGAAAATGGGAGCCAAATGATGGTAGCCAATTTCTACCCAGCATGCCCTCAACCAGACCTTACACTTGGGATACCCCCTCACTCCGATTATGGCTTCCTCACTCTTCTCCTACAAGACGAGGTAGAAGGCTTGCAAATCCAACACCAAGACAAATGGATCACTGTTCAACCCATTCCCAATGCCTTCGTTGTCAATGTTGGTGATCACTTAGAGATATATAGCAATGGAAAATACAAGAGCGTATTGCATAGAGTTGTGGTGAATGAAGCTAAGAGTAGGGTGTCGGTGGCTTCGCTGCATAGCCTTCCATTCAACTGCACGGTGAGACCGTCGCCAAAACTCGTTGACGAAGCGAATCCCAAGCGTTACATGGACACTGATTTTAGGACCTTTCTTGCGTACGTATCCTCCAGAGAGCCTAAAAAAAAGGATTTCCTGGAGTCTAGAAAAGTTGCATTAAATTGA 1320 0.4341 MELVVRFNSELSNRFLQNLLLLPHFSFFPSLYIHQNFDNNNTSYSCLFSVSLLLTLIIYYLFLNQEPIYRSPAMALNEQKGKDDIPESQYQKGVKQLCEKGHLNAVPKNYILPVSERPTKSSVEDTNVVKQNLQLPIIDFAELLGPNRPQVLQSLANACQQYGFFQLVNHCMLEDVVRSMIDVSGRFFDLPLEERAKYMTTDMRAPVRCGTSFSQTKDTVLCWRDFLKLLCHPLPDFLPHWPASPVDFRKVVGTYAEETKHLFLVVMDAILESLGIMEDNILKDFENGSQMMVANFYPACPQPDLTLGIPPHSDYGFLTLLLQDEVEGLQIQHQDKWITVQPIPNAFVVNVGDHLEIYSNGKYKSVLHRVVVNEAKSRVSVASLHSLPFNCTVRPSPKLVDEANPKRYMDTDFRTFLAYVSSREPKKKDFLESRKVALN* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1577 439 Pfam non-haem dioxygenase in morphine synthesis N-terminal 135 233 IPR026992 -
Gso3g1577 439 Gene3D - 86 419 IPR027443 -
Gso3g1577 439 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 83 436 - -
Gso3g1577 439 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 287 387 IPR005123 -
Gso3g1577 439 Pfam 2OG-Fe(II) oxygenase superfamily 290 385 IPR044861 -
Gso3g1577 439 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 83 436 - -
Gso3g1577 439 SUPERFAMILY Clavaminate synthase-like 95 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1577 Gso-Chr3 41727939 41731267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1577 91 416 Glycosyltransferase AT5G59530 36.202 3.11e-53 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1577 - - gmx:100782572 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1577 3 41727939 41731267 Gso3g1577 3 41727939 41731267 ECH
Gso19g1557 19 44531117 44534701 Gso3g1577 3 41727939 41731267 GST
Gso3g1577 3 41727939 41731267 Gso10g0544 10 6088227 6091761 PCT
Gso10g0544 10 6088227 6091761 Gso3g1577 3 41727939 41731267 PCT