Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0544 ATGTCTCCAGCAATGGTGGTAGGAAGTGGTGAGAAGGGTGAGAGTGATACACCAGGAAATCAATATCAGAAAGGAGTGAAACAGCTTGTTGAGAATGGCCTTCACACAATACCTAAAAAGTACATACTTCCTCCTTCTGATCGACCAGCTACAAATTCAGAAAATTCAAATGTTGCCAAGCAAAACCTTCAGCTACCCATCATTGATTTTTCTGAATTGATTGGTCCAAGAAGGCCCCAAGTCCTTCAATCTCTAGCCAATGCTTGTGAACGCTACGGATTTTTTCAGCTGGTAAACCATGGCATATCAGATGATGTTATAAGCAGCATGAGGGATGTGAGTGGCAGGTTCTTCGATCTTCCTTTTGAGGAAAGAGCCAAACACATGACAACTGATATGCATGCACCGGTTAGATATGGAACAAGCTTCAGCCAAACCAAAGATACTGTGTTCTGTTGGAGGGACTTCTTGAAACTCCTCTGCCATCCCTTGCCTGATTTCCTCCCTCATTGGCCTGCTTCCCCCTTAGACTTTAGGAAAGTGGTGGCTACCTACTCAGAAGAAACAAAATACTTATTTCTGATGTTGATGGAAGCTATCCAAGAGAGCCTAGGAATCAAAGTAGAAGTCAAGAAGCAAGAAGAGGAGACAGAAGGAAATGACAATAATATTCTGAAGGACTTGGAAGATGGGAGCCAGATGATGGTGGTCAATTTCTACCCACCATGCCCTGAACCAGACCTAACCTTGGGGATGCCCCCTCATTCTGATTATGGATTCCTCACACTCCTCCTCCAAGACCAGGTGGAGGGTTTGCAAATCCAATTCCAAGGTCAATGGCTCACTGTCAAACCTATCAATAACGCTTTCGTTGTCAATGTTGGTGATCACCTAGAGATATACAGCAACGGGAAATACAAGAGCGTGTTACATAGGGTTATTGTTAATGCAATGAAGAAAAGGACATCTGTGGCTTCGCTGCATAGCCTTCCTTTCAACTGCACCGTAAGACCGTCACCCAAACTCATTGACGAAGCCAACCCCAAACGTTACGCAGACACGAATTTTGATACTTTTCTTGCATACGTTTCCACCAGAGAGCCAAAGAGAAAGGAATTCCTGGACTCTAGGAAATTGTCTTCTACATGA 1149 0.4404 MSPAMVVGSGEKGESDTPGNQYQKGVKQLVENGLHTIPKKYILPPSDRPATNSENSNVAKQNLQLPIIDFSELIGPRRPQVLQSLANACERYGFFQLVNHGISDDVISSMRDVSGRFFDLPFEERAKHMTTDMHAPVRYGTSFSQTKDTVFCWRDFLKLLCHPLPDFLPHWPASPLDFRKVVATYSEETKYLFLMLMEAIQESLGIKVEVKKQEEETEGNDNNILKDLEDGSQMMVVNFYPPCPEPDLTLGMPPHSDYGFLTLLLQDQVEGLQIQFQGQWLTVKPINNAFVVNVGDHLEIYSNGKYKSVLHRVIVNAMKKRTSVASLHSLPFNCTVRPSPKLIDEANPKRYADTNFDTFLAYVSTREPKRKEFLDSRKLSST* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0544 382 SUPERFAMILY Clavaminate synthase-like 24 364 - -
Gso10g0544 382 Gene3D - 19 362 IPR027443 -
Gso10g0544 382 PRINTS Isopenicillin N synthase signature 85 102 - -
Gso10g0544 382 PRINTS Isopenicillin N synthase signature 255 276 - -
Gso10g0544 382 PRINTS Isopenicillin N synthase signature 290 316 - -
Gso10g0544 382 MobiDBLite consensus disorder prediction 1 21 - -
Gso10g0544 382 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 230 330 IPR005123 -
Gso10g0544 382 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 16 379 - -
Gso10g0544 382 Pfam non-haem dioxygenase in morphine synthesis N-terminal 65 163 IPR026992 -
Gso10g0544 382 Pfam 2OG-Fe(II) oxygenase superfamily 233 328 IPR044861 -
Gso10g0544 382 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 16 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0544 Gso-Chr10 6088227 6091761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0544 23 359 Glycosyltransferase AT5G59530 34.104 8.69e-54 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0544 - - gmx:100805175 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1557 19 44531117 44534701 Gso10g0544 10 6088227 6091761 PCT
Gso3g1577 3 41727939 41731267 Gso10g0544 10 6088227 6091761 PCT
Gso10g0544 10 6088227 6091761 Gso19g1557 19 44531117 44534701 PCT
Gso10g0544 10 6088227 6091761 Gso3g1577 3 41727939 41731267 PCT