Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1520 ATGGATGCCAAGGTATTCAAATTCCAGATCCTCCAAGGCTCCATCGCTAAGCGCGTGGTCATTCGCTCAATACTACTCGCGTGCGCCGTCTCAATTGTCTCCATCTACCGCGCGCAATCCCTCTTCGATTTCGGAACCCTCGCTCCCATCGCCACGTACTTCGACTGCGTTTCCGGCTTCGAGGGCGTCACCTTTCGCCCTGGTTCCCACTTGCTCCGAACCCGCTTCTGGGCCTCCGCCAATTGCGAGAAAGACGCCAACTTGACCCTCTCCGTGGTCACCGACCTAACTGGTAACAATTTACTCTACACCGGAGCGAAAAGCCTCTGCGTCGGAGAAGGCTCCTCAATGGCCGTCACGGCAATGAAACAGTTAGGTTTCTCCAGCGTCAGCGCCGTCCAAACGCACCGTTTCGTGCAGAGGAACGTCCTGTACGAGGATAACTCCTTCGATTTCGTGTTCTCCAGAGACCTAGACAAGGTTTCTGTCCCAGCATTGCTGGTGCTCGAGGTTGAGCGTGTCCTTAAGCCACGTGGCATTGGTGCCTTTCTTGTAGGCACCACTAGTTCTCACCCCAATGATTTGATAAGAGCAGCCACACCCGTTTCCTCTTTGTTAAGGTCTTCCAATGTTGTGCATGTTGGTTCTGTCAACGAGCTTAACCTTGTTGTTTTCAAGAAACGAGTTGGAAACGCTACTTCATTTTACCAACATGGTAATTTACCCGCTGATTGTCCCAGTCTCACATTCACTAAATCCCTCATAGAGTTGATGGAGCCTCTCGTGAGTGAGAAACAAAAACCACCACCTCTTGAGTTTCACAAGAGGATTCCCTATTTGCCTAAATTTGTGGATGTTTCCACTAGGAAGAGGTTGGTGTATATTGACATTGGGGTAGGGGAGCTTCTTGATGCCAATGTTAGTGATTGGTTCCTACCATCGTACCCCATTGATCAGAAGGATTTCAATATTTATTTTGTTCACTACAACACTTCGATTATGTTGTCCCATGTGAAGCAACCTGGTATTACCTTTGTTTACCACCCTGGCTTGTCTGGTATTGATAAGGTCAATGCTAAGCTTGGTAGTGATGATGATGATGACATGGATCCTTTACTTGGGGAGGAGGAGAAGTTTGATTTCCTTGCCTGGTTCAAAGAAACTGTGCAATATGCTGATTTTGTGGTCCTCAAGATGAATGCAGGCAGTGTTGAACTCAAGTTCCTCTCTGATATATTTGAGAATGGAGCTATATGCTATGTTGATGAGTTGTTTCTCAAGTGTCCCGAGAGGGGAGGTGATGCCAGCAAGGGAAGTTGCATGGATATTTACAAGGATCTCCGAAGCAATGGTGTCTATGTGCATCAATGGTGGGGAGACTGA 1383 0.4794 MDAKVFKFQILQGSIAKRVVIRSILLACAVSIVSIYRAQSLFDFGTLAPIATYFDCVSGFEGVTFRPGSHLLRTRFWASANCEKDANLTLSVVTDLTGNNLLYTGAKSLCVGEGSSMAVTAMKQLGFSSVSAVQTHRFVQRNVLYEDNSFDFVFSRDLDKVSVPALLVLEVERVLKPRGIGAFLVGTTSSHPNDLIRAATPVSSLLRSSNVVHVGSVNELNLVVFKKRVGNATSFYQHGNLPADCPSLTFTKSLIELMEPLVSEKQKPPPLEFHKRIPYLPKFVDVSTRKRLVYIDIGVGELLDANVSDWFLPSYPIDQKDFNIYFVHYNTSIMLSHVKQPGITFVYHPGLSGIDKVNAKLGSDDDDDMDPLLGEEEKFDFLAWFKETVQYADFVVLKMNAGSVELKFLSDIFENGAICYVDELFLKCPERGGDASKGSCMDIYKDLRSNGVYVHQWWGD* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1520 460 Pfam Methyltransferase domain 141 180 IPR013216 GO:0008168
Gso3g1520 460 PANTHER PEPTIDE UPSTREAM PROTEIN 1 460 - -
Gso3g1520 460 PANTHER UPSTREAM ORF PROTEIN, PUTATIVE-RELATED 1 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1520 Gso-Chr3 41081510 41083575 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1520 - - gmx:100783651 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1506 19 43893202 43895229 Gso3g1520 3 41081510 41083575 GST
Gso3g1520 3 41081510 41083575 Gso13g1073 13 25197995 25199728 PCT
Gso13g1073 13 25197995 25199728 Gso3g1520 3 41081510 41083575 PCT