Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1506 ATGGACACCAAGGCATTCAAATTCCAGATCCTTACTAGCTCCATCGCCAGGCGCGTGCTCCTTCGCACAATCCTACTCGCGTGCGCTGTCTCGTTTGTCTCTCTGTACCGCGCCCTATCCCTCTTCGATTTCGGAACCCTCGCTCCCATCGCCACCTACTTCGACTGCGTCTCCGGCTTCCAGAGCGTCACCTTCCGCCCCGGTTCCCCCTTACTCCGAACCCGGTTCGGGGTCTCCGCCAATTGCGAGAAAGACGCCAATTTGACCCTCACTGTGGTCACCGAGCTAACCGGTAGCCGGTTACTCCACCCCGGAGCTAAAAGCCTCTGCGTCGGAGAAGGCTCCTCAATGGCCGTCACGGCAATGAAACAGTTAGGTTTTTTCTCCAGCGTCAGCGCCGTCCAAACGCACCGTTTCGAGCAGAGGAACGTCCTGTACGAGGATAATTCCTTCGATTTCGTGTTCTCGAGAGACCTAGACAAGGTTTCTGTCCCGGCATTGCTGGTTCTCGAGGTTGAGCGTGTCCTTAAGCCAGGTGGCGTTGGTGTCTTCCTTGTAGGCACCACAAGTTCTCACCCCAATGACATGATAAGAGCAGCCACACCTGTGTCCTCGTTATTAAGGTCTTCCAATGTTGTGCATGTTGGTTCTGTCAACGACCATAACCTTGTTGTTTTCAAGAAACGAGTTGAAAACGCTACTTTGTTTTACCAACATGGTTTACCCGCTGATTGTCCCAGTGTCACCTTCACCAAACCCCTTATAGAGTTAATGGAGCCTCTCGTGAGTGAGAAACAACAACAACCACCGATTGAGTTTCACAAGAGGAATATTCCCTATTTGCCTAAGTTTGTGGATGTTTCCACTAGGAAGAGGTTGGTGTATATTGACATTGGGGTAGGGGAGCTTCTTGATGCCAATGTTAGTGATTGTTGGTTCCTACCATCGTACCCCATTGATCAGAAGGATTTCAATGTTTATTTTGTTCACTACAACACTTCGATTATGTTGTCCTATGTGAAGCGACCTGGTATTACCTTTGTTTACCACCCTGGCTTGGCTGGTATTGATAAGGTCAATGCTAAGCTTGGTAGTGATGATGATGATGACATGGATCCTTTACTTGGGGAGGAGGAGAAGTTTGATTTCCCTGCGTGGTTCAAAGAAACTGTGCAATATGCTGATTTTGTGGTCCTCAAGATGAACGCAGGAAGTGTTGAGCTCAAGTTCCTCTCGGACATATTTGAGAATGGAGCTATATGCTTTGTTGATGAGTTGTTTCTCAAGTGTCCCGAGAGGAGGGGAGGTGATGAGAAAAGTGTAACCAGCAAGGAAAGTTGCATGGATATTTACAAGGCTCTCCGAAGCAATGGTGTCTATGTGCATCAATGGTGGGGAGACTGA 1404 0.4886 MDTKAFKFQILTSSIARRVLLRTILLACAVSFVSLYRALSLFDFGTLAPIATYFDCVSGFQSVTFRPGSPLLRTRFGVSANCEKDANLTLTVVTELTGSRLLHPGAKSLCVGEGSSMAVTAMKQLGFFSSVSAVQTHRFEQRNVLYEDNSFDFVFSRDLDKVSVPALLVLEVERVLKPGGVGVFLVGTTSSHPNDMIRAATPVSSLLRSSNVVHVGSVNDHNLVVFKKRVENATLFYQHGLPADCPSVTFTKPLIELMEPLVSEKQQQPPIEFHKRNIPYLPKFVDVSTRKRLVYIDIGVGELLDANVSDCWFLPSYPIDQKDFNVYFVHYNTSIMLSYVKRPGITFVYHPGLAGIDKVNAKLGSDDDDDMDPLLGEEEKFDFPAWFKETVQYADFVVLKMNAGSVELKFLSDIFENGAICFVDELFLKCPERRGGDEKSVTSKESCMDIYKALRSNGVYVHQWWGD* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1506 467 Gene3D Vaccinia Virus protein VP39 117 220 IPR029063 -
Gso19g1506 467 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 142 191 IPR029063 -
Gso19g1506 467 PANTHER UPSTREAM ORF PROTEIN, PUTATIVE-RELATED 1 467 - -
Gso19g1506 467 Pfam Methyltransferase domain 138 183 IPR013216 GO:0008168
Gso19g1506 467 PANTHER PEPTIDE UPSTREAM PROTEIN 1 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1506 Gso-Chr19 43893202 43895229 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1506 - - gmx:100806816 931.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1506 19 43893202 43895229 Gso3g1520 3 41081510 41083575 GST
Gso19g1506 19 43893202 43895229 Gso13g1073 13 25197995 25199728 PCT
Gso13g1073 13 25197995 25199728 Gso19g1506 19 43893202 43895229 PCT