Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1503 ATGGGCTCACTAGAAAGATCAAAGAAGAAAGTCCTTCTATGGAAGAAGGCCATGCTCCATTTTTCTCTATGTTTTGTGATGGGGGTTTTCACAGGCTTGGCTCCAACAGGTAAATCTTCTCTCTTTTCCACCACAGTTAGTGTCTCAAATAGAACAGAATTTGCACCACAACCCAGTGAAATGTTACACCTCACAACAAATGTCAATAGAAGTTGGATAGCTCCAACCCCAGATTCCATGCCCGTGAAGCCTAGAATCCTTGAAAATGAAAAGAAAACAACAACAAAAAAGTTGCATGTAAAAGCACAGCCCCAGTTGAAGCCTAGAAGACTCCTAATCATTGTAACTCCAACAAGCACAAAACTACCCCACCAAGCAGTGTTTTTGAGAAGGTTGGCAAATACTATAAAGCTGGTTCCTCAACCGTTGCTGTGGATTGTTGTGGAAGCTAAAACCAATTCCACAGAACTGCCAGAGATACTAAGGAAAACTGGCATCATGTATAGGCATGTGGTTTTCAAGGAAAATTTCACGGAATTAGAAGCTGAACTCAATCACCAGAGGAATCTTGCGCTTAAGCACATTGAGCACCACAGGCTCAATGGCATTGTACACTTTGCTGGCCTTTCCAATGTTTATGATCTCCAATTCTTCCATCAGCTTAGAGATATTGAGGTCTTTGGAACATGGCCAACAGCTTTGTTAGCTGCACACAGGAAGAAAGTGAAAATCGAAGGACCTGTATGTGATTCATCACAAGTCATTGGTTGGCATCTTAGGAATATGAACAATGAAACTGATACTATCACTCCCCCAATTCATATTTCAAGTTTTGCTTTTAATAGCTCCATCCTTTGGGACTCTGAGAGATGGGGTCGCACTTCCTCTGTTCAAGACACTTCTCAGAATTCGATCAAGTTCGTGAAGCAAGTAGTTCTAGAGGATGAGGCTAAATTAAAGGGAATTCCACCAGAGGATTGCTCCAAAATCTTGCTCTGGCGTTTCAATTTTCGTGCCAGAACTCATTAA 1029 0.4169 MGSLERSKKKVLLWKKAMLHFSLCFVMGVFTGLAPTGKSSLFSTTVSVSNRTEFAPQPSEMLHLTTNVNRSWIAPTPDSMPVKPRILENEKKTTTKKLHVKAQPQLKPRRLLIIVTPTSTKLPHQAVFLRRLANTIKLVPQPLLWIVVEAKTNSTELPEILRKTGIMYRHVVFKENFTELEAELNHQRNLALKHIEHHRLNGIVHFAGLSNVYDLQFFHQLRDIEVFGTWPTALLAAHRKKVKIEGPVCDSSQVIGWHLRNMNNETDTITPPIHISSFAFNSSILWDSERWGRTSSVQDTSQNSIKFVKQVVLEDEAKLKGIPPEDCSKILLWRFNFRARTH* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1503 342 Pfam Glycosyltransferase family 43 132 336 IPR005027 GO:0015018|GO:0016020
Gso3g1503 342 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9-RELATED 1 341 - -
Gso3g1503 342 SUPERFAMILY Nucleotide-diphospho-sugar transferases 110 339 IPR029044 -
Gso3g1503 342 CDD GlcAT-I 110 339 IPR005027 GO:0015018|GO:0016020
Gso3g1503 342 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 111 342 IPR029044 -
Gso3g1503 342 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 341 IPR005027 GO:0015018|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1503 Gso-Chr3 40935467 40939367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1503 1 341 Glycosyltransferase AT2G37090 61.318 1.79e-151 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1503 K20869 - gmx:100777749 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1503 3 40935467 40939367 Gso3g1503 3 40935467 40939367 ECH
Gso19g1489 19 43734910 43737660 Gso3g1503 3 40935467 40939367 GST
Gso3g1503 3 40935467 40939367 Gso10g0436 10 4634384 4636926 PCT
Gso10g0436 10 4634384 4636926 Gso3g1503 3 40935467 40939367 PCT